RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TMEM185B	Q9H7F4	350 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	POPDC3	Q9HBV1	291 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	MID1IP1	Q9NPA3	183 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	KIAA1456	Q9P272	454 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	ABCD2	Q9UBJ2	740 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TRMT6	Q9UJA5	497 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	PCTP	Q9UKL6	214 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	RAB26	Q9ULW5	256 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	NOSIP	Q9Y314	301 aa	Known RBP	3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	TIMM22	Q9Y584	194 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	AP4S1	Q9Y587	144 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	PCDHA9	Q9Y5H5	950 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	DNAJC15	Q9Y5T4	150 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	GPR45	Q9Y5Y3	372 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	LYVE1	Q9Y5Y7	322 aa		3.92	□□□□□ -1.78
MSI2-216	ENST00000582772	IGHV3-15	A0A0B4J1V0	119 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772		A0A1B0GVG6	124 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	TCRBV5S2	A0A599	114 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC22A23	A1A5C7	686 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	SAC3D1	A6NKF1	404 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	FOXE1	O00358	373 aa	Predicted RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GPR171	O14626	319 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	PHYH	O14832	338 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	XRCC3	O43542	346 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	TIPRL	O75663	272 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	OR4F21	O95013	312 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	FSTL3	O95633	263 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GPR75	O95800	540 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	OPN1LW	P04000	364 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ADH4	P08319	380 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CT62	P0C5K7	136 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF35	P13682	527 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GFAP	P14136	432 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GP9	P14770	177 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	LBP	P18428	481 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GSTT1	P30711	240 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ARR3	P36575	388 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ALDH3B2	P48448	385 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GIPR	P48546	466 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	MRPL19	P49406	292 aa	Known RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	GSK3B	P49841	420 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC16A1	P53985	500 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	UFM1	P61960	85 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	TXNL4A	P83876	142 aa	Known RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CLC	Q05315	142 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	STX5	Q13190	355 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	LSAMP	Q13449	338 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CAMK2D	Q13557	499 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	MAPRE2	Q15555	327 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	C11orf91	Q3C1V1	193 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	VPS26B	Q4G0F5	336 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	PAGE3	Q5JUK9	113 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	SAMD4B	Q5PRF9	694 aa	Known RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	MRNIP	Q6NTE8	343 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	AFTPH	Q6ULP2	937 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772		Q6ZS46	218 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772		Q6ZSN1	163 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CBLL1	Q75N03	491 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	KLB	Q86Z14	1044 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ADGRG5	Q8IZF4	528 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772		Q8N1Y9	231 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF283	Q8N7M2	679 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ANKFN1	Q8N957	763 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	TTL	Q8NG68	377 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CLHC1	Q8NHS4	586 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	RHEBL1	Q8TAI7	183 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	POC1B	Q8TC44	478 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CD200R1	Q8TD46	325 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ZFP90	Q8TF47	636 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	EEF1AKMT1	Q8WVE0	214 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CANT1	Q8WVQ1	401 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	PEX13	Q92968	403 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	LHX4	Q969G2	390 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ST6GALNAC6	Q969X2	333 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	RNFT2	Q96EX2	444 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	WDR34	Q96EX3	536 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CNBD2	Q96M20	576 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM110A	Q9BQ89	295 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF649	Q9BS31	505 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	RTN4R	Q9BZR6	473 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	ROGDI	Q9GZN7	287 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	REXO4	Q9GZR2	422 aa	Known RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	CCDC68	Q9H2F9	335 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	FN3K	Q9H479	309 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	PELI2	Q9HAT8	420 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	RETN	Q9HD89	108 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	A4GALT	Q9NPC4	353 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	PAPOLB	Q9NRJ5	636 aa	Known RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	AIG1	Q9NVV5	245 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	MS4A12	Q9NXJ0	267 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	NDRG4	Q9ULP0	352 aa	Known RBP	3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	VDAC3	Q9Y277	283 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	SSPO	A2VEC9	5147 aa		3.91	□□□□□ -1.78
MSI2-216	ENST00000582772	IGLV1-36	A0A0B4J1U3	117 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NCF1B	A6NI72	391 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	BBIP1	A8MTZ0	92 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	NCF1C	A8MVU1	366 aa	Predicted RBP	3.9	□□□□□ -1.79
MSI2-216	ENST00000582772	C22orf46	C9J442	243 aa		3.9	□□□□□ -1.79
MSI2-216	ENST00000582772		H0YJX3	145 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms