RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 BTNL3Q6UXE8 466 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 HIPK4Q8NE63 616 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 OR4K5Q8NGD3 323 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 BBS10Q8TAM1 723 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 FGFBP3Q8TAT2 258 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 WFDC12Q8WWY7 111 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 TAF15Q92804 592 aaKnown RBP eCLIP10.09□□□□□ -0.79
CTNS-208ENST00000574218 TMEM54Q969K7 222 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 ZNF566Q969W8 418 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 SLC41A3Q96GZ6 507 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 SLC30A2Q9BRI3 323 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 NUF2Q9BZD4 464 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 SLC19A3Q9BZV2 496 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 RAD21L1Q9H4I0 556 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 NANOGQ9H9S0 305 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 TPT1P8Q9HAU6 139 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 TMEM38BQ9NVV0 291 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 CGGBP1Q9UFW8 167 aaPredicted RBP10.09□□□□□ -0.79
CTNS-208ENST00000574218 RAP2CQ9Y3L5 183 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 CHST2Q9Y4C5 530 aa10.09□□□□□ -0.79
CTNS-208ENST00000574218 IGKV1D-42A0A075B6H8 117 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 WDR91A4D1P6 747 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 TRAPPC2LH3BP13 241 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 PLPP3O14495 311 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 DHHO43323 396 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 UBOX5O94941 541 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 MFN2O95140 757 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 TGDSO95455 350 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 BGLAPP02818 100 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 TNFSF4P23510 183 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 IFFO1Q0D2I5 559 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 SLC35D2Q76EJ3 337 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 LSMEM1Q8N8F7 131 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 OR5J2Q8NH18 312 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 OR6X1Q8NH79 312 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 IPCEF1Q8WWN9 437 aaPredicted RBP10.08□□□□□ -0.8
CTNS-208ENST00000574218 GEMIN6Q8WXD5 167 aaKnown RBP10.08□□□□□ -0.8
CTNS-208ENST00000574218 TEX37Q96LM6 180 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 SPATA5L1Q9BVQ7 753 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 RMND5AQ9H871 391 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 PATZ1Q9HBE1 687 aaKnown RBP10.08□□□□□ -0.8
CTNS-208ENST00000574218 CCNB1IP1Q9NPC3 277 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 AIG1Q9NVV5 245 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 PDP1Q9P0J1 537 aaPredicted RBP10.08□□□□□ -0.8
CTNS-208ENST00000574218 EGFL7Q9UHF1 273 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 ZDHHC8Q9ULC8 765 aa10.08□□□□□ -0.8
CTNS-208ENST00000574218 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
CTNS-208ENST00000574218 FAM181BA6NEQ2 426 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
CTNS-208ENST00000574218 RNF13O43567 381 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 ITM2AO43736 263 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 MT-ATP6P00846 226 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 IGHV2-70P01814 119 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 SERPINE1P05121 402 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 IL6P05231 212 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 IGHV4-38-2P0DP08 117 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 PRKAR1BP31321 381 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 RGS8P57771 180 aaPredicted RBP10.07□□□□□ -0.8
CTNS-208ENST00000574218 CLRN1P58418 232 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 TNFAIP6P98066 277 aaPredicted RBP10.07□□□□□ -0.8
CTNS-208ENST00000574218 SRSF4Q08170 494 aaKnown RBP10.07□□□□□ -0.8
CTNS-208ENST00000574218 TMEM155Q4W5P6 130 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 C6orf10Q5SRN2 563 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 SPATA46Q5T0L3 261 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 THEM4Q5T1C6 240 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 FAM205BPQ63HN1 556 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 OGFOD2Q6N063 350 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 JAZF1Q86VZ6 243 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 KRT73Q86Y46 540 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 C1orf174Q8IYL3 243 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
CTNS-208ENST00000574218 ITCHQ96J02 903 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 PKNOX2Q96KN3 472 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 MOGAT1Q96PD6 335 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 BCL2L10Q9HD36 194 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 NPHS2Q9NP85 383 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 TNFRSF19Q9NS68 423 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 IL20RAQ9UHF4 553 aa10.07□□□□□ -0.8
CTNS-208ENST00000574218 POLR3KQ9Y2Y1 108 aaPredicted RBP10.07□□□□□ -0.8
CTNS-208ENST00000574218 TRAV40A0A0B4J280 105 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 ZSCAN5BA6NJL1 495 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 A8MXK9 166 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 TIMM8AO60220 97 aaPredicted RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 MGRN1O60291 552 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 ZNF500O60304 480 aaPredicted RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 IGHG1P01857 330 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 HIST1H2ABP04908 130 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 VIMP08670 466 aaKnown RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 QDPRP09417 244 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 ALDOCP09972 364 aaKnown RBP10.06□□□□□ -0.8
CTNS-208ENST00000574218 ZCCHC18P0CG32 403 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 TNFRSF1AP19438 455 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 STOMP27105 288 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 HTR2AP28223 471 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 IL12AP29459 219 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 SLC6A9P48067 706 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 SLC1A6P48664 564 aa10.06□□□□□ -0.8
CTNS-208ENST00000574218 GDI2P50395 445 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms