RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SYCE1LA8MT33 242 aa2.53□□□□□ -2
VRK1-207ENST00000557352 K7ERQ8 282 aa2.53□□□□□ -2
VRK1-207ENST00000557352 NDUFAB1O14561 156 aa2.53□□□□□ -2
VRK1-207ENST00000557352 CFLARO15519 480 aa2.53□□□□□ -2
VRK1-207ENST00000557352 UGT1A9O60656 530 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SRP72O76094 671 aaKnown RBP2.53□□□□□ -2
VRK1-207ENST00000557352 TSPAN12O95859 305 aa2.53□□□□□ -2
VRK1-207ENST00000557352 IGLV3-19P01714 112 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SERPINE1P05121 402 aa2.53□□□□□ -2
VRK1-207ENST00000557352 UGT2B4P06133 528 aa2.53□□□□□ -2
VRK1-207ENST00000557352 FCER2P06734 321 aa2.53□□□□□ -2
VRK1-207ENST00000557352 CTSLP07711 333 aa2.53□□□□□ -2
VRK1-207ENST00000557352 CT45A10P0DMU9 189 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ZNF7P17097 686 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 ZP3P21754 424 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ALDH3A1P30838 453 aa2.53□□□□□ -2
VRK1-207ENST00000557352 NUDT1P36639 197 aa2.53□□□□□ -2
VRK1-207ENST00000557352 NSG1P42857 185 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SPINT3P49223 89 aa2.53□□□□□ -2
VRK1-207ENST00000557352 STK19P49842 368 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 DIO3P55073 304 aa2.53□□□□□ -2
VRK1-207ENST00000557352 TAS2R39P59534 338 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SSTP61278 116 aa2.53□□□□□ -2
VRK1-207ENST00000557352 PLOD1Q02809 727 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 CARTPTQ16568 116 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ZSCAN26Q16670 478 aa2.53□□□□□ -2
VRK1-207ENST00000557352 KCTD19Q17RG1 926 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 TMEM52BQ4KMG9 183 aa2.53□□□□□ -2
VRK1-207ENST00000557352 GPAT3Q53EU6 434 aa2.53□□□□□ -2
VRK1-207ENST00000557352 LDLRAP1Q5SW96 308 aa2.53□□□□□ -2
VRK1-207ENST00000557352 N4BP2L1Q5TBK1 243 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 HHATQ5VTY9 493 aa2.53□□□□□ -2
VRK1-207ENST00000557352 LRRC66Q68CR7 880 aa2.53□□□□□ -2
VRK1-207ENST00000557352 NEK5Q6P3R8 708 aa2.53□□□□□ -2
VRK1-207ENST00000557352 CNSTQ6PJW8 725 aa2.53□□□□□ -2
VRK1-207ENST00000557352 C6orf89Q6UWU4 347 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ZYG11AQ6WRX3 759 aa2.53□□□□□ -2
VRK1-207ENST00000557352 PRSS48Q7RTY5 328 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ADAMTSL2Q86TH1 951 aa2.53□□□□□ -2
VRK1-207ENST00000557352 PIANPQ8IYJ0 282 aa2.53□□□□□ -2
VRK1-207ENST00000557352 C4orf33Q8N1A6 199 aa2.53□□□□□ -2
VRK1-207ENST00000557352 TRAM1L1Q8N609 369 aa2.53□□□□□ -2
VRK1-207ENST00000557352 OR13C4Q8NGS5 318 aa2.53□□□□□ -2
VRK1-207ENST00000557352 RNASE8Q8TDE3 154 aaKnown RBP2.53□□□□□ -2
VRK1-207ENST00000557352 DYDC1Q8WWB3 177 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ZNF75CPQ92670 426 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 FGF14Q92915 247 aa2.53□□□□□ -2
VRK1-207ENST00000557352 RAB39BQ96DA2 213 aa2.53□□□□□ -2
VRK1-207ENST00000557352 L3HYPDHQ96EM0 354 aa2.53□□□□□ -2
VRK1-207ENST00000557352 DTD2Q96FN9 168 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ZNF514Q96K75 400 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 TSNARE1Q96NA8 513 aa2.53□□□□□ -2
VRK1-207ENST00000557352 CCT7Q99832 543 aa2.53□□□□□ -2
VRK1-207ENST00000557352 OMDQ99983 421 aa2.53□□□□□ -2
VRK1-207ENST00000557352 P2RY13Q9BPV8 354 aa2.53□□□□□ -2
VRK1-207ENST00000557352 FAM173AQ9BQD7 235 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ACAT2Q9BWD1 397 aa2.53□□□□□ -2
VRK1-207ENST00000557352 TSSK1BQ9BXA7 367 aa2.53□□□□□ -2
VRK1-207ENST00000557352 TM6SF2Q9BZW4 377 aa2.53□□□□□ -2
VRK1-207ENST00000557352 UGT1A7Q9HAW7 530 aa2.53□□□□□ -2
VRK1-207ENST00000557352 UGT1A10Q9HAW8 530 aa2.53□□□□□ -2
VRK1-207ENST00000557352 UGT1A8Q9HAW9 530 aa2.53□□□□□ -2
VRK1-207ENST00000557352 RDH14Q9HBH5 336 aa2.53□□□□□ -2
VRK1-207ENST00000557352 NMRAL1Q9HBL8 299 aa2.53□□□□□ -2
VRK1-207ENST00000557352 IL26Q9NPH9 171 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SLC17A7Q9P2U7 560 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SLC2A6Q9UGQ3 507 aa2.53□□□□□ -2
VRK1-207ENST00000557352 GNPTGQ9UJJ9 305 aa2.53□□□□□ -2
VRK1-207ENST00000557352 EMCNQ9ULC0 261 aa2.53□□□□□ -2
VRK1-207ENST00000557352 DIMT1Q9UNQ2 313 aaKnown RBP2.53□□□□□ -2
VRK1-207ENST00000557352 STK38LQ9Y2H1 464 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ARL2BPQ9Y2Y0 163 aa2.53□□□□□ -2
VRK1-207ENST00000557352 DHRS7Q9Y394 339 aa2.53□□□□□ -2
VRK1-207ENST00000557352 ARL5AQ9Y689 179 aa2.53□□□□□ -2
VRK1-207ENST00000557352 NUP210LQ5VU65 1888 aa2.53□□□□□ -2
VRK1-207ENST00000557352 COL5A1P20908 1838 aaPredicted RBP2.53□□□□□ -2
VRK1-207ENST00000557352 EXPH5Q8NEV8 1989 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 TRIM64A6NGJ6 449 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 TRIM64BA6NI03 449 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 LOC730098B7Z3J9 87 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 SPECC1L-ADORA2AF8WAN1 911 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 K7EQS6 105 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 MBTPS2O43462 519 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 VEGFDO43915 354 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 NME2P1O60361 137 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 SPAG7O75391 227 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 VPS26AO75436 327 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 PIAS1O75925 651 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 DCTN3O75935 186 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 ATP5HO75947 161 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 SOD1P00441 154 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 FTH1P02794 183 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 FGF4P08620 206 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 ALPIP09923 528 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 OR56A5P0C7T3 313 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 CCDC166P0CW27 439 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 MPC1LP0DKB6 136 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 TROVE2P10155 538 aaKnown RBP eCLIP2.52□□□□□ -2.01
VRK1-207ENST00000557352 MYL2P10916 166 aa2.52□□□□□ -2.01
VRK1-207ENST00000557352 RALBP11234 206 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms