RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MNDAP41218 407 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 AKR1C3P42330 323 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 MAGEA12P43365 314 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 FASLGP48023 281 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RFX2P48378 723 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 CYB561P49447 251 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PDLIM4P50479 330 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RPL14P50914 215 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 EFNA3P52797 238 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 LOXL3P58215 753 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RRAS2P62070 204 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 BDH1Q02338 343 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RBPJQ06330 500 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF616Q08AN1 781 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 SKP2Q13309 424 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 SLC10A1Q14973 349 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ABRAXAS2Q15018 415 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TBCEQ15813 527 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 UBE2SQ16763 222 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 QRICH1Q2TAL8 776 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM249Q2WGJ8 235 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 SMIM21Q3B7S5 101 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PTCHD3Q3KNS1 767 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RFTN2Q52LD8 501 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF628Q5EBL2 1059 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PYY3Q5JQD4 70 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TPRG1LQ5T0D9 272 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 FNBP1LQ5T0N5 605 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 NCMAPQ5T1S8 102 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 NCR3LG1Q68D85 454 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 XAF1Q6GPH4 301 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ADNP2Q6IQ32 1131 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 NPNTQ6UXI9 565 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TPRG1Q6ZUI0 275 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF720Q7Z2F6 126 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 S100A7AQ86SG5 101 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TSPAN33Q86UF1 283 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 LRRC28Q86X40 367 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 BAP18Q8IXM2 172 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF100Q8IYN0 542 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 HS3ST5Q8IZT8 346 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 SLC39A11Q8N1S5 342 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 DHRSXQ8N5I4 330 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 METTL13Q8N6R0 699 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 FRMD1Q8N878 549 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM161BQ8NDZ6 487 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 FBXL13Q8NEE6 735 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 OR52E1Q8NGJ3 308 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 OR6K3Q8NGY3 331 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RXFP4Q8TDU9 374 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 C2CD4CQ8TF44 421 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 DUSP19Q8WTR2 217 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ABHD3Q8WU67 409 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 RGP1Q92546 391 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 KCNJ9Q92806 393 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 GHSRQ92847 366 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM186Q96B77 213 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 CTHRC1Q96CG8 243 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 BPIFA2Q96DR5 249 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ARSGQ96EG1 525 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 MRPS24Q96EL2 167 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 DAZAP1Q96EP5 407 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 CPNE2Q96FN4 548 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 CERS2Q96G23 380 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ZC3HAV1LQ96H79 300 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ERMAPQ96PL5 475 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 OR2V2Q96R30 315 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 OR2A14Q96R47 310 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PANX1Q96RD7 426 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 LPAR4Q99677 370 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 OMDQ99983 421 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ATG101Q9BSB4 218 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 SYT11Q9BT88 431 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 URM1Q9BTM9 101 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 DPCDQ9BVM2 203 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TRMT61BQ9BVS5 477 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 CHST5Q9GZS9 411 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 IL22Q9GZX6 179 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ARV1Q9H2C2 271 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ARRDC1-AS1Q9H2J1 176 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 CLMPQ9H6B4 373 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TMEM38AQ9H6F2 299 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 GAR1Q9NY12 217 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 SCN3BQ9NY72 215 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 USE1Q9NZ43 259 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 MRPL15Q9P015 296 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 OPTCQ9UBM4 332 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ZNF223Q9UK11 482 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PITPNC1Q9UKF7 332 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 FBXL3Q9UKT7 428 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PADI3Q9ULW8 664 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TFR2Q9UP52 801 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 ANGPT4Q9Y264 503 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 GSTK1Q9Y2Q3 226 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 STRAPQ9Y3F4 350 aaKnown RBP3.98□□□□□ -1.77
ATXN3-227ENST00000554491 LYVE1Q9Y5Y7 322 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 EVPLQ92817 2033 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 TEX15Q9BXT5 2789 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PCNX2A6NKB5 2137 aa3.98□□□□□ -1.77
ATXN3-227ENST00000554491 PTPRBP23467 1997 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms