RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZCCHC3Q9NUD5 404 aaKnown RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ACER3Q9NUN7 267 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 B3GNT2Q9NY97 397 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 PDP1Q9P0J1 537 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 TXNDC16Q9P2K2 825 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 B3GAT1Q9P2W7 334 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ATP6V1HQ9UI12 483 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 OSGIN1Q9UJX0 560 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 FZR1Q9UM11 496 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MGAT4BQ9UQ53 548 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 FIS1Q9Y3D6 152 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 DTNAQ9Y4J8 743 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 DNAJC15Q9Y5T4 150 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SAR1BQ9Y6B6 198 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MXRA5Q9NR99 2828 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 RYR2Q92736 4967 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 RPS10-NUDT3A0A1W2PQS6 291 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 LIPT2A6NK58 231 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 B9A039 149 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 FTCDNL1E5RQL4 147 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 TRAPPC2LH3BP13 241 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 KIF2AO00139 706 aaPredicted RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SULT2B1O00204 365 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SCAMP2O15127 329 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF264O43296 627 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 PLPP2O43688 288 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NPIPB7O75200 414 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SMIM24O75264 130 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SEC22BO75396 215 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 PMS2P2O95744 297 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NUDT14O95848 222 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 HPRP00739 348 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 KRT6AP02538 564 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 PRB2P02812 416 aaPredicted RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 KRT6BP04259 564 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SHBGP04278 402 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CSF3P09919 207 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NUDT17P0C025 328 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 GKN3PP0CG01 181 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 OR12D1P0DN82 309 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 UBL4AP11441 157 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 BCKDHAP12694 445 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF35P13682 527 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 HLA-DOBP13765 273 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 PTMSP20962 102 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 MATN1P21941 496 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 OMGP23515 440 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 IL12AP29459 219 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NTSP30990 170 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 RYKP34925 604 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SRP14P37108 136 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 EIF1P41567 113 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ACAA2P42765 397 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CDKN2CP42773 168 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 RFX2P48378 723 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 KRT6CP48668 564 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 IDH2P48735 452 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CCT3P49368 545 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CCR4P51679 360 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 AQP5P55064 265 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 OR2B6P58173 313 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 GNG11P61952 73 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 RPL38P63173 70 aaKnown RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ACTG1P63261 375 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 IL1RL1Q01638 556 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 MERTKQ12866 999 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 LCP2Q13094 533 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CEACAM7Q14002 265 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 PCLAFQ15004 111 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SYPL1Q16563 259 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ARHGAP11BQ3KRB8 267 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 C6orf10Q5SRN2 563 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 PDSS1Q5T2R2 415 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NXNQ6DKJ4 435 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 OR4F3Q6IEY1 312 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 KRT80Q6KB66 452 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 C3orf33Q6P1S2 294 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CASP12Q6UXS9 341 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ZYG11AQ6WRX3 759 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 WDR88Q6ZMY6 472 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 CREB3L2Q70SY1 520 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF771Q7L3S4 317 aaPredicted RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SLC46A3Q7Z3Q1 461 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SZRD1Q7Z422 152 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SPATA21Q7Z572 469 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 C10orf111Q8N326 155 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SIGLECL1Q8N7X8 197 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 C3orf56Q8N813 242 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 COX18Q8N8Q8 333 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ANKFN1Q8N957 763 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SGMS2Q8NHU3 365 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 KIF18AQ8NI77 898 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 ZFAND2BQ8WV99 257 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM45BQ96B21 275 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 APH1AQ96BI3 265 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 TXNDC15Q96J42 360 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 TEX37Q96LM6 180 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 SLC38A2Q96QD8 506 aa2.65□□□□□ -1.99
SLIRP-202ENST00000553981 NAPGQ99747 312 aaPredicted RBP2.65□□□□□ -1.99
SLIRP-202ENST00000553981 C1orf50Q9BV19 199 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms