RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TP53BP1Q12888 1972 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 A0A0D9SG52 128 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 LOC390937A0A1W2PQ73 354 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 GOSR2O14653 212 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 RAD1O60671 282 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 GP1BAP07359 652 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 UCHL1P09936 223 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 SLC2A5P22732 501 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TSPAN7P41732 249 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 NR0B1P51843 470 aaKnown RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 OC90Q02509 493 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 CRMP1Q14194 572 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 PRTGQ2VWP7 1150 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 FAM199XQ6PEV8 388 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM88Q6PEY1 159 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 LDLRAD3Q86YD5 345 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ARMC10Q8N2F6 343 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 C19orf47Q8N9M1 422 aaKnown RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 RCBTB1Q8NDN9 531 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 OR13C5Q8NGS8 318 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 VSTM2LQ96N03 204 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF559Q9BR84 538 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 LMF2Q9BU23 707 aaKnown RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 NRIP3Q9NQ35 241 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 MIOXQ9UGB7 285 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 PYCARD-AS1I3L0S3 204 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ACOT7O00154 380 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 EIF4E2O60573 245 aaKnown RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM127O75204 238 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 RCBTB2O95199 551 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 AK1P00568 194 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 VSIG10L2P0DP72 767 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 CTSEP14091 401 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 AGTR1P30556 359 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 CCR5P51681 352 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 NUBP1P53384 320 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 SLC16A1P53985 500 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF85Q03923 595 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 RNF212Q495C1 297 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 SSX6Q7RTT6 188 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 SERPINA12Q8IW75 414 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 METTL27Q8N6F8 245 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 C1orf216Q8TAB5 229 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 GCDHQ92947 438 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ADGRL4Q9HBW9 690 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 ST6GALNAC2Q9UJ37 374 aa11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM184BQ9Y519 407 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 FAM86C2PA6NEL3 165 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 NPIPB9F8W1W9 429 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 OGG1O15527 345 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 IGLV3-19P01714 112 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 IFI6P09912 130 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 SBK2P0C263 348 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 PTH2RP49190 550 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 P2RX1P51575 399 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 HCCSP53701 268 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 ACTC1P68032 377 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 ACTA1P68133 377 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 SORDQ00796 357 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
SHMT2-207ENST00000553837 C2orf68Q2NKX9 166 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM69Q5SWH9 247 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 DHRS7BQ6IAN0 325 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-207ENST00000553837 KIRREL2Q6UWL6 708 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 LINC00114Q6XXX2 140 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 PUSL1Q8N0Z8 303 aaKnown RBP11.12□□□□□ -0.63
SHMT2-207ENST00000553837 ARL14Q8N4G2 192 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 OR5J2Q8NH18 312 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 SMPDL3BQ92485 455 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 SMAD5Q99717 465 aaKnown RBP11.12□□□□□ -0.63
SHMT2-207ENST00000553837 MAP3K3Q99759 626 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 CCDC86Q9H6F5 360 aaKnown RBP11.12□□□□□ -0.63
SHMT2-207ENST00000553837 LRIT1Q9P2V4 623 aa11.12□□□□□ -0.63
SHMT2-207ENST00000553837 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 GPR31O00270 319 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 IMPA2O14732 288 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 MAGEB4O15481 346 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-207ENST00000553837 RAB40ALP0C0E4 278 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 CT45A8P0DMV1 189 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 CT45A9P0DMV2 189 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 MAOAP21397 527 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 DCTDP32321 178 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 RAB4BP61018 213 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 SERTAD2Q14140 314 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 CT45A2Q5DJT8 189 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 FAAP20Q6NZ36 180 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
SHMT2-207ENST00000553837 FCRLAQ7L513 359 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms