RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 LNP1A1A4G5 178 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 UNC119BA6NIH7 251 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 IFITM5A6NNB3 132 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF726A6NNF4 738 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 H0YIV9 168 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 M0R143 59 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 NDUFS8O00217 210 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CLDN5O00501 218 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 AQP7O14520 342 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 GAPDHSO14556 408 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FLRT2O43155 660 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TGOLN2O43493 480 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SYT7O43581 403 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DOK2O60496 412 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ABLIM3O94929 683 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 AIFM1O95831 613 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TRBC1P01850 177 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 GBAP04062 536 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RLN1P04808 185 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 GZMBP10144 247 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 C6P13671 934 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FOLR1P15328 257 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TMEM11P17152 192 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CD22P20273 847 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DGKAP23743 735 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ZBTB25P24278 435 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HTR2CP28335 458 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TACR3P29371 465 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DLSTP36957 453 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 MC3RP41968 323 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RBM34P42696 430 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 LPAR6P43657 344 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SULT1A1P50225 295 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 NPY4RP50391 375 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CASP9P55211 416 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RGS8P57771 180 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TAS2R20P59543 309 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 MAXP61244 160 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RPS23P62266 143 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HSF1Q00613 529 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ARHGAP1Q07960 439 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 IL15RAQ13261 267 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DDX39BQ13838 428 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 GRB14Q14449 540 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 MEF2DQ14814 521 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC10A1Q14973 349 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 PGGHGQ32M88 737 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DCAF4L1Q3SXM0 396 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 C14orf28Q4W4Y0 310 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RNASE12Q5GAN4 147 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FBXO47Q5MNV8 452 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 STPG1Q5TH74 334 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TMEM268Q5VZI3 342 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 AWAT2Q6E213 333 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FAM71E1Q6IPT2 247 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 NIPAL3Q6P499 406 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 LCTLQ6UWM7 567 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 METTL7BQ6UX53 244 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DLK2Q6UY11 383 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CERS6Q6ZMG9 384 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 MEPCEQ7L2J0 689 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CXXC5Q7LFL8 322 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TMPRSS11BQ86T26 416 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 LRRTM4Q86VH4 590 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF573Q86YE8 665 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RBM45Q8IUH3 476 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 IZUMO1Q8IYV9 350 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 KIR2DL5AQ8N109 375 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 BEST3Q8N1M1 668 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TMEM99Q8N816 258 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CLEC1AQ8NC01 280 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 C17orf47Q8NEP4 570 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 OR4C16Q8NGL9 310 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 OR1J1Q8NGS3 322 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 OR2L8Q8NGY9 312 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 OR5AK2Q8NH90 309 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 PAQR8Q8TEZ7 354 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DUSP19Q8WTR2 217 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 MAFIPQ8WZ33 124 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 PIGKQ92643 395 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 MIB2Q96AX9 1013 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FAM122AQ96E09 287 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 NEURL3Q96EH8 262 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 RRNAD1Q96FB5 475 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TMEM169Q96HH4 297 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 IP6K3Q96PC2 410 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms