RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ACKR4Q9NPB9 350 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 MRPS18AQ9NVS2 196 aaKnown RBP13.32□□□□□ -0.28
HOXC11-202ENST00000546378 AKAP7Q9P0M2 348 aaPredicted RBP13.32□□□□□ -0.28
HOXC11-202ENST00000546378 OPN4Q9UHM6 478 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 EDARQ9UNE0 448 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF337Q9Y3M9 751 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 H0YIG0 161 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 AIPO00170 330 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 SCGB1D2O95969 90 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 IFNGR1P15260 489 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 UGT2B7P16662 529 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 PVALBP20472 110 aaPredicted RBP13.31□□□□□ -0.28
HOXC11-202ENST00000546378 DNASE1L1P49184 302 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 RAP2BP61225 183 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 CLVS2Q5SYC1 327 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 RPL22L1Q6P5R6 122 aaKnown RBP13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ETV3LQ6ZN32 361 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF765Q7L2R6 523 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 KRT77Q7Z794 578 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ADGRG3Q86Y34 549 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ESX1Q8N693 406 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF615Q8N8J6 731 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 PXT1Q8NFP0 134 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 OR1S2Q8NGQ3 325 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 PMM1Q92871 262 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 CRB3Q9BUF7 120 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 OR11A1Q9GZK7 315 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 KCNJ13O60928 360 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 CALCBP10092 127 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
HOXC11-202ENST00000546378 IGFALSP35858 605 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ACTC1P68032 377 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ACTA1P68133 377 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 RBMS2Q15434 407 aaKnown RBP13.31□□□□□ -0.28
HOXC11-202ENST00000546378 C2orf76Q3KRA6 126 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 BPIFB2Q8N4F0 458 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 OR52H1Q8NGJ2 320 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 RSC1A1Q92681 617 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 C12orf57Q99622 126 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 APOOQ9BUR5 198 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ANKRD19PQ9H560 264 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ISYNA1Q9NPH2 558 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 CA14Q9ULX7 337 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 B9D1Q9UPM9 204 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 COLQQ9Y215 455 aaPredicted RBP13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ZDBF2Q9HCK1 2354 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 XKRYO14609 159 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 CYB5AP00167 134 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 OR2T7P0C7T2 308 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 CD34P28906 385 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ID4P47928 161 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 KCNJ3P48549 501 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 PRKXP51817 358 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 AGBL4Q5VU57 503 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ARMC6Q6NXE6 501 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 STEAP1BQ6NZ63 245 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 Q6ZS52 159 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 TMPPEQ6ZT21 453 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 RASGRP3Q8IV61 690 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF321PQ8N8H1 164 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 OR2T27Q8NH04 317 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 RLN3Q8WXF3 142 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 SYNDIG1Q9H7V2 258 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 FAM60AQ9NP50 221 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 MED17Q9NVC6 651 aa13.31□□□□□ -0.28
HOXC11-202ENST00000546378 TMEM82A0PJX8 343 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 D6RAR5 112 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 TNRC18O15417 2968 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 CACNA1GO43497 2377 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ITGA5P08648 1049 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 FRKP42685 505 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 KIR2DL1P43626 348 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 OR1D4P47884 311 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ACTA2P62736 377 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ACTG2P63267 376 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SRSF3P84103 164 aaKnown RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SERTAD2Q14140 314 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ARHGAP19Q14CB8 494 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ARHGAP11BQ3KRB8 267 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 MOGAT2Q3SYC2 334 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SLC25A30Q5SVS4 291 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF101Q8IZC7 436 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 CDRT4Q8N9R6 151 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 OR2L8Q8NGY9 312 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 LHFPL5Q8TAF8 219 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 POLR1DQ9Y2S0 133 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 PLSCR5A0PG75 271 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 PRSS38A1L453 326 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 WISP1O95388 367 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SFTPBP07988 381 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 GABRA1P14867 456 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 CTRB1P17538 263 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SLC2A5P22732 501 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 NHLRC3Q5JS37 347 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 CTRB2Q6GPI1 263 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SLC16A13Q7RTY0 426 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 OOSP2Q86WS3 158 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms