RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CHURC1-FNTBB4DL54 471 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 OR2A4O95047 310 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 WNT11O96014 354 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 RENP00797 406 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 CD3DP04234 171 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 ZNF35P13682 527 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 APEHP13798 732 aaKnown RBP14.29□□□□□ -0.12
LDLR-204ENST00000545707 GTF2F2P13984 249 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 FNTBP49356 437 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 C2orf76Q3KRA6 126 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 NHLRC3Q5JS37 347 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 NKAIN2Q5VXU1 208 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 ASPHD2Q6ICH7 369 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 TMEM184AQ6ZMB5 413 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 SLC36A1Q7Z2H8 476 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 PRSS58Q8IYP2 241 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 COQ8AQ8NI60 647 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 ZNF417Q8TAU3 575 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 LIPHQ8WWY8 451 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 RBPMSQ93062 196 aaKnown RBP14.29□□□□□ -0.12
LDLR-204ENST00000545707 C4orf45Q96LM5 186 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 OR2A7Q96R45 310 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 LRP4O75096 1905 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 FXYD6-FXYD2A0A087WZ82 144 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 SUSD5O60279 629 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 IL33O95760 270 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 TXNDC12O95881 172 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 ACSM4P0C7M7 580 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 M6PRP20645 277 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 HSD17B7P56937 341 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 RAP2BP61225 183 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 OR7E24Q6IFN5 339 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 MUC20Q8N307 709 aaPredicted RBP14.28□□□□□ -0.12
LDLR-204ENST00000545707 SDR16C5Q8N3Y7 309 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 FXYD6Q9H0Q3 95 aa14.28□□□□□ -0.12
LDLR-204ENST00000545707 A0A1B0GTQ1 180 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 TMEM212A6NML5 194 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 GOSR2O14653 212 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 SMAD9O15198 467 aaKnown RBP14.27□□□□□ -0.12
LDLR-204ENST00000545707 IL5P05113 134 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 DRD1P21728 446 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 MRPS21P82921 87 aaKnown RBP14.27□□□□□ -0.12
LDLR-204ENST00000545707 SQSTM1Q13501 440 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 ANKRD16Q6P6B7 361 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 Q6ZS52 159 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 GALNT11Q8NCW6 608 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 MCHR2Q969V1 340 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 WBP1Q96G27 269 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 ZMAT3Q9HA38 289 aaKnown RBP14.27□□□□□ -0.12
LDLR-204ENST00000545707 NUP50Q9UKX7 468 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 WDR87Q6ZQQ6 2873 aa14.27□□□□□ -0.12
LDLR-204ENST00000545707 TEX51A0A1B0GUA7 166 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 LDOC1O95751 146 aaPredicted RBP14.27□□□□□ -0.13
LDLR-204ENST00000545707 CXCR1P25024 350 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 EPHA4P54764 986 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 HLXQ14774 488 aaPredicted RBP14.27□□□□□ -0.13
LDLR-204ENST00000545707 RBMS2Q15434 407 aaKnown RBP14.27□□□□□ -0.13
LDLR-204ENST00000545707 TMEM205Q6UW68 189 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 DNM1P46Q6ZS02 220 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 TTLL10Q6ZVT0 673 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 TMEM151BQ8IW70 566 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 KDM8Q8N371 416 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 OTOSQ8NHW6 89 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 TCTN2Q96GX1 697 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 UTP23Q9BRU9 249 aaKnown RBP14.27□□□□□ -0.13
LDLR-204ENST00000545707 MRI1Q9BV20 369 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 TMEM138Q9NPI0 162 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 OPN4Q9UHM6 478 aa14.27□□□□□ -0.13
LDLR-204ENST00000545707 CDV3Q9UKY7 258 aaKnown RBP14.27□□□□□ -0.13
LDLR-204ENST00000545707 SNRPGP15A8MWD9 76 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 SLC16A7O60669 478 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 SPARCP09486 303 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 PPICP45877 212 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 EFNA3P52797 238 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 SEC61A1P61619 476 aaKnown RBP14.26□□□□□ -0.13
LDLR-204ENST00000545707 SKP1P63208 163 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 ZP2Q05996 745 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 ARHGAP40Q5TG30 622 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 FAM174AQ8TBP5 190 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 STK35Q8TDR2 534 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 FAM3DQ96BQ1 224 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 LINC00052Q96N35 136 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 DMRTA2Q96SC8 542 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 ARL6Q9H0F7 186 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 ATG5Q9H1Y0 275 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 MPZL1O95297 269 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 MNDAP41218 407 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 GABRA4P48169 554 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 MAP2K6P52564 334 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 DHODHQ02127 395 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 MFGE8Q08431 387 aaPredicted RBP14.26□□□□□ -0.13
LDLR-204ENST00000545707 METTL21AQ8WXB1 218 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 LANCL2Q9NS86 450 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 DHCR7Q9UBM7 475 aaKnown RBP14.26□□□□□ -0.13
LDLR-204ENST00000545707 B9D1Q9UPM9 204 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 SDK1Q7Z5N4 2213 aa14.26□□□□□ -0.13
LDLR-204ENST00000545707 TMEM272A0A1B0GTI8 110 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 UBE2QL1A1L167 161 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms