RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ISPDA4D126 451 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 IGHV2-70P01814 119 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 ADH4P08319 380 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 PGA4P0DJD7 388 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 PGA3P0DJD8 388 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 ADORA3P0DMS8 318 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 ZNF12P17014 697 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 MPV17P39210 176 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 CDH12P55289 794 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 SEC61A1P61619 476 aaKnown RBP13.06□□□□□ -0.32
CD4-212ENST00000544344 IFFO1Q0D2I5 559 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 BST1Q10588 318 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 MOGQ16653 247 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 TMEM53Q6P2H8 277 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 MSANTD1Q6ZTZ1 278 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 SLC35D2Q76EJ3 337 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 DPPA2Q7Z7J5 298 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 ZNF101Q8IZC7 436 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 OR1J1Q8NGS3 322 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 ST7LQ8TDW4 575 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 IPCEF1Q8WWN9 437 aaPredicted RBP13.06□□□□□ -0.32
CD4-212ENST00000544344 GTF2H4Q92759 462 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 SLC25A28Q96A46 364 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 MARS2Q96GW9 593 aaKnown RBP13.06□□□□□ -0.32
CD4-212ENST00000544344 SLC25A44Q96H78 314 aaPredicted RBP13.06□□□□□ -0.32
CD4-212ENST00000544344 ITCHQ96J02 903 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 RNF121Q9H920 327 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 INSIG2Q9Y5U4 225 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 AUP1Q9Y679 476 aa13.06□□□□□ -0.32
CD4-212ENST00000544344 CLIC1O00299 241 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 FARS2O95363 451 aaKnown RBP13.05□□□□□ -0.32
CD4-212ENST00000544344 MT-ATP6P00846 226 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 IGHMP01871 453 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 MT-ND5P03915 603 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 QDPRP09417 244 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 IDO1P14902 403 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 DRD4P21917 467 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 GCH1P30793 250 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 WNT5AP41221 380 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 FADDQ13158 208 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 STX3Q13277 289 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 MELKQ14680 651 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 SLC36A2Q495M3 483 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 C10orf53Q8N6V4 93 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
CD4-212ENST00000544344 OR9I1Q8NGQ6 314 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 OR1J2Q8NGS2 313 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 NFKBIDQ8NI38 313 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 ZNF566Q969W8 418 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 RMND5AQ9H871 391 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 SDR39U1Q9NRG7 319 aaPredicted RBP13.05□□□□□ -0.32
CD4-212ENST00000544344 PDP1Q9P0J1 537 aaPredicted RBP13.05□□□□□ -0.32
CD4-212ENST00000544344 KLHL21Q9UJP4 597 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 TRIM33Q9UPN9 1127 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
CD4-212ENST00000544344 A8MXK9 166 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 HDAC3O15379 428 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 ENTPD5O75356 428 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 PTHP01270 115 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 OMGP23515 440 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 SLC6A9P48067 706 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 SLC3A1Q07837 685 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 C6orf10Q5SRN2 563 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 THEM4Q5T1C6 240 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 SWT1Q5T5J6 900 aaKnown RBP13.04□□□□□ -0.32
CD4-212ENST00000544344 C9orf139Q6ZV77 190 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 SLC16A14Q7RTX9 510 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 MSRB3Q8IXL7 192 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 GEMIN6Q8WXD5 167 aaKnown RBP13.04□□□□□ -0.32
CD4-212ENST00000544344 TMIGD2Q96BF3 282 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 MAELQ96JY0 434 aaKnown RBP13.04□□□□□ -0.32
CD4-212ENST00000544344 TMEM109Q9BVC6 243 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 PATZ1Q9HBE1 687 aaKnown RBP13.04□□□□□ -0.32
CD4-212ENST00000544344 TMEM27Q9HBJ8 222 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
CD4-212ENST00000544344 SLC25A37Q9NYZ2 338 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 ZIM2Q9NZV7 527 aa13.04□□□□□ -0.32
CD4-212ENST00000544344 LOC100509620A0A075B734 347 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 IQCMA0A1B0GVH7 501 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 C5orf58C9J3I9 102 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 LYPD3O95274 346 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 CD55P08174 381 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 SBK2P0C263 348 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 POLR2JP52435 117 aaKnown RBP13.03□□□□□ -0.32
CD4-212ENST00000544344 RGS8P57771 180 aaPredicted RBP13.03□□□□□ -0.32
CD4-212ENST00000544344 PAX8Q06710 450 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 ZNF74Q16587 644 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 PABPC1L2AQ5JQF8 200 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 MBNL2Q5VZF2 373 aaKnown RBP13.03□□□□□ -0.32
CD4-212ENST00000544344 SLC2A7Q6PXP3 512 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 JAZF1Q86VZ6 243 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 LRRC18Q8N456 261 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
CD4-212ENST00000544344 KLF14Q8TD94 323 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms