RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 DCTDP32321 178 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 MAB21L1Q13394 359 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 KLF9Q13886 244 aaPredicted RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 IL11RAQ14626 422 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 ACKR1Q16570 336 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 COL28A1Q2UY09 1125 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 GXYLT1Q4G148 440 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 C1orf189Q5VU69 101 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 SHEQ5VZ18 495 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 STAC2Q6ZMT1 411 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 ZNF574Q6ZN55 896 aaPredicted RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 LRRTM1Q86UE6 522 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 GHDCQ8N2G8 530 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 OR10Z1Q8NGY1 313 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 SLC22A8Q8TCC7 542 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 LGALS14Q8TCE9 139 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 MCHR2Q969V1 340 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 SYT4Q9H2B2 425 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 DIABLOQ9NR28 239 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 ALKBH4Q9NXW9 302 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 PILRBQ9UKJ0 227 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 PCNX3Q9H6A9 2034 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 PI4KAP42356 2102 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 PRR32B1ATL7 298 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 EEF1E1O43324 174 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 SCRG1O75711 98 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 AKR7A3O95154 331 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 NUDT14O95848 222 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 OR8G3PP0DMU2 310 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 SNRPBP14678 240 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 BTCP35070 178 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 PSMB10P40306 273 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 DUSP3P51452 185 aaPredicted RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 EMP2P54851 167 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 GLO1Q04760 184 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 TNK1Q13470 666 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 ANGPT1Q15389 498 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 CD276Q5ZPR3 534 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 OLFML2AQ68BL7 652 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 LANCL3Q6ZV70 420 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 BTN2A1Q7KYR7 527 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 CPEB2Q7Z5Q1 589 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 ZNF227Q86WZ6 799 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 SMAP2Q8WU79 429 aaPredicted RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 ZNF524Q96C55 264 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 GFI1Q99684 422 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 NRSN2Q9GZP1 204 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 EMC7Q9NPA0 242 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 KLHL9Q9P2J3 617 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 KLHL13Q9P2N7 655 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 NUFIP1Q9UHK0 495 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 B3GALT5Q9Y2C3 310 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 KLHDC2Q9Y2U9 406 aa8.89□□□□□ -0.99
SS18-205ENST00000542420 AK6Q9Y3D8 172 aaKnown RBP8.89□□□□□ -0.99
SS18-205ENST00000542420 LOC102723996A0A087X1L8 192 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 IGHV5-10-1A0A0J9YXX1 117 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 LINC00854A0A1B0GVQ3 168 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 ATP6V1G2-DDX39BF2Z307 99 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 DCTN6O00399 190 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 PAHP00439 452 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 TDGF1P13385 188 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 ADH6P28332 368 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 PUDPQ08623 228 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 DMWDQ09019 674 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 PAPD4Q6PIY7 484 aaKnown RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 IL20RBQ6UXL0 311 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 H1FNTQ75WM6 255 aaPredicted RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 FGD2Q7Z6J4 655 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 PM20D2Q8IYS1 436 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 OR56B4Q8NH76 319 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 ASB10Q8WXI3 467 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 C8orf44Q96CB5 159 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 CCDC120Q96HB5 630 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 WDR77Q9BQA1 342 aaPredicted RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 CHST11Q9NPF2 352 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 ANKRD10Q9NXR5 420 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 KCNG2Q9UJ96 466 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 IKZF2Q9UKS7 526 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 MEGF11A6BM72 1044 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 ACOT7O00154 380 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 TCRBP04435 133 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 ISG15P05161 165 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 FBXO45P0C2W1 286 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 TFPIP10646 304 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 GZMKP49863 264 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 RIDAP52758 137 aaKnown RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 ART1P52961 327 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 INSM1Q01101 510 aaPredicted RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 CCDC85BQ15834 202 aaPredicted RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 PRAMEF17Q5VTA0 474 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 PWWP2BQ6NUJ5 590 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 MRPL14Q6P1L8 145 aaKnown RBP8.88□□□□□ -0.99
SS18-205ENST00000542420 RHOUQ7L0Q8 258 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 LINGO2Q7L985 606 aa8.88□□□□□ -0.99
SS18-205ENST00000542420 DPY19L4Q7Z388 723 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms