RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 GCM1Q9NP62 436 aa6.17□□□□□ -1.42
HMBOX1-208ENST00000521516 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.17□□□□□ -1.42
HMBOX1-208ENST00000521516 TBK1Q9UHD2 729 aa6.17□□□□□ -1.42
HMBOX1-208ENST00000521516 MKLN1Q9UL63 735 aa6.17□□□□□ -1.42
HMBOX1-208ENST00000521516 POLR3HQ9Y535 204 aaPredicted RBP6.17□□□□□ -1.42
HMBOX1-208ENST00000521516 PRAMEF27A3QJZ7 478 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 FAM159BA6NKW6 160 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 E7ESA3 106 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 AKAP8O43823 692 aaKnown RBP6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 ZNF205O95201 554 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 PTHP01270 115 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 C2P06681 752 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 CRATP43155 626 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 SPATA46Q5T0L3 261 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 DCDC5Q6ZRR9 648 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 CYS1Q717R9 158 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 VRK2Q86Y07 508 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 TMEM139Q8IV31 216 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 BEND2Q8NDZ0 799 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 OR56A1Q8NGH5 318 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 PSMA8Q8TAA3 256 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 SLC25A40Q8TBP6 338 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 SLC7A13Q8TCU3 470 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 TUBGCP3Q96CW5 907 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 PRR25Q96S07 402 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 RNF121Q9H920 327 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 B3GAT2Q9NPZ5 323 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 C20orf141Q9NUB4 165 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 PPP2R2CQ9Y2T4 447 aa6.16□□□□□ -1.42
HMBOX1-208ENST00000521516 A8MVM7 634 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 FBP2O00757 339 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 NPFFO15130 113 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 CHST1O43916 411 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 HSD17B3P37058 310 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 GATA4P43694 442 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 FOXA1P55317 472 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 ARL4CP56559 192 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 GSTA3Q16772 222 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 FAM153CQ494X1 144 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 XKR7Q5GH72 579 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 C1orf140Q5VVS0 124 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 KLC3Q6P597 504 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 LIAT1Q6ZQX7 453 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 Q6ZR03 302 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 OLIG3Q7RTU3 272 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 DPPA2Q7Z7J5 298 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 MRPL41Q8IXM3 137 aaKnown RBP6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 MFSD8Q8NHS3 518 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 METTL6Q8TCB7 284 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 PPCDCQ96CD2 204 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 ZNF382Q96SR6 550 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 OR2J1Q9GZK6 312 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 MYLK2Q9H1R3 596 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 REEP4Q9H6H4 257 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 DNAH11Q96DT5 4516 aa6.15□□□□□ -1.42
HMBOX1-208ENST00000521516 QDPRP09417 244 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 MYF6P23409 242 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 CXCR1P25024 350 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 WNT5AP41221 380 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 CCT3P49368 545 aaKnown RBP6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 ARF6P62330 175 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 KCNJ10P78508 379 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 CHI3L2Q15782 390 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 LY6EQ16553 131 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 ZNF181Q2M3W8 571 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 SPDYAQ5MJ70 313 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 TMEM53Q6P2H8 277 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 VMO1Q7Z5L0 202 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 IGFN1Q86VF2 1251 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 SLC22A24Q8N4F4 322 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 OR5D16Q8NGK9 328 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 PNPT1Q8TCS8 783 aaKnown RBP6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 LINC00476Q8WZB0 136 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 CNOT9Q92600 299 aaKnown RBP6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 DCTN5Q9BTE1 182 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 ZMAT4Q9H898 229 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 ZNF446Q9NWS9 450 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 KPTNQ9Y664 436 aa6.15□□□□□ -1.43
HMBOX1-208ENST00000521516 A0A1B0GVI7 797 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 A0A1B0GW55 424 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 SURF4O15260 269 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 ENTPD5O75356 428 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 CYB5R3P00387 301 aaPredicted RBP6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 PAHP00439 452 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 DUX4L2P0CJ85 424 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 DUX4L3P0CJ86 424 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 DUX4L5P0CJ88 424 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 DUX4L6P0CJ89 424 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 DUX4L7P0CJ90 424 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 HMOX2P30519 316 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 CASQ1P31415 396 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 CLCQ05315 142 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 PDIA2Q13087 525 aaKnown RBP6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 TP53BP2Q13625 1128 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 C1DQ13901 141 aaKnown RBP6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 PPP1R7Q15435 360 aa6.14□□□□□ -1.43
HMBOX1-208ENST00000521516 AANATQ16613 207 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms