RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 P2RY8Q86VZ1 359 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SPATA5L1Q9BVQ7 753 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 BOKQ9UMX3 212 aaPredicted RBP7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 KCNIP3Q9Y2W7 256 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 CENPVL1A0A0U1RR11 272 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 MARCH11A6NNE9 402 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SCDO00767 359 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SLC22A3O75751 556 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 S100A8P05109 93 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SMIM6P0DI80 62 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 CYP4B1P13584 511 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SLC7A1P30825 629 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 PTGFRP43088 359 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 AKR1C2P52895 323 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 PSG6Q00889 435 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 AKR1C1Q04828 323 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 AQP6Q13520 282 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 KIAA0040Q15053 153 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 KRBOX4Q5JUW0 171 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 COX20Q5RI15 118 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 GPR139Q6DWJ6 353 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 HEPHL1Q6MZM0 1159 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 MZT2AQ6P582 158 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 C3orf49Q96BT1 292 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SEPHS2Q99611 448 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 RSRP1Q9BUV0 290 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 DCSTAMPQ9H295 470 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 SLC6A13Q9NSD5 602 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 B4GALT7Q9UBV7 327 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 ANGPT4Q9Y264 503 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 CELSR1Q9NYQ6 3014 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
LIMCH1-219ENST00000514096 EI24O14681 340 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 UTS2O95399 124 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CSTAP01040 98 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CT45A8P0DMV1 189 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CT45A9P0DMV2 189 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 DRD2P14416 443 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 MERTKQ12866 999 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 TOMM34Q15785 309 aaPredicted RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 GGTA1PQ4G0N0 100 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CT45A2Q5DJT8 189 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 LHFPL2Q6ZUX7 228 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 EIF3MQ7L2H7 374 aaKnown RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 GHDCQ8N2G8 530 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 KDM8Q8N371 416 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 LRRC18Q8N456 261 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 C19orf18Q8NEA5 215 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 OR10H4Q8NGA5 316 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ADAMTS18Q8TE60 1221 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 C22orf15Q8WYQ4 148 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 RPL3LQ92901 407 aaKnown RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 RRNAD1Q96FB5 475 aaKnown RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 PLEKHB1Q9UF11 243 aaPredicted RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CES1P1Q9UKY3 287 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 A0A1W2PR80 420 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 PRAMEF25A6NGN4 478 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 M0R233 179 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ANGPTL1O95841 491 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 PCGF2P35227 344 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 GZMKP49863 264 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 UBE2G2P60604 165 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 EXOSC2Q13868 293 aaKnown RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 SCGB2B2Q4G0G5 96 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 PLA1AQ53H76 456 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 BEX5Q5H9J7 111 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 WDR73Q6P4I2 378 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 APOOLQ6UXV4 268 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 NKAIN4Q8IVV8 208 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 OR4M1Q8NGD0 313 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 THAP6Q8TBB0 222 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ROBO4Q8WZ75 1007 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ZNF681Q96N22 645 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CPPED1Q9BRF8 314 aaPredicted RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 METTL9Q9H1A3 318 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 BEX1Q9HBH7 125 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ZFP64Q9NPA5 681 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ZNF701M0R085 212 aaPredicted RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 VAMP5O95183 116 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 FADS2O95864 444 aaKnown RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 IFNA4P05014 189 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CTSSP25774 331 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CRABP1P29762 137 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CLDN20P56880 219 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 RAB4BP61018 213 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 IL5RAQ01344 420 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 CYP51A1Q16850 503 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ZNF181Q2M3W8 571 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 ZNF404Q494X3 552 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 RNF212Q495C1 297 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 RBM48Q5RL73 367 aaKnown RBP7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 DCST1Q5T197 706 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 MZT2BQ6NZ67 158 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 MAVSQ7Z434 540 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 GPAT4Q86UL3 456 aa7.11□□□□□ -1.27
LIMCH1-219ENST00000514096 TMEM200AQ86VY9 491 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms