RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 MBOAT4Q96T53 435 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 FAM173AQ9BQD7 235 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 MGME1Q9BQP7 344 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 FICDQ9BVA6 458 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 SUCNR1Q9BXA5 334 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 CACNG6Q9BXT2 260 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 GABARAPL1Q9H0R8 117 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 OPN3Q9H1Y3 402 aaPredicted RBP4.59□□□□□ -1.67
GYPB-212ENST00000511198 KAT8Q9H7Z6 458 aaKnown RBP4.59□□□□□ -1.67
GYPB-212ENST00000511198 GORASP2Q9H8Y8 452 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 NTN4Q9HB63 628 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 ACKR4Q9NPB9 350 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 CCDC177Q9NQR7 707 aaPredicted RBP4.59□□□□□ -1.67
GYPB-212ENST00000511198 FAM118AQ9NWS6 357 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 CCDC59Q9P031 241 aaKnown RBP4.59□□□□□ -1.67
GYPB-212ENST00000511198 POLG2Q9UHN1 485 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 CAMK2AQ9UQM7 478 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 ADAM18Q9Y3Q7 739 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 DNAJC15Q9Y5T4 150 aa4.59□□□□□ -1.67
GYPB-212ENST00000511198 A0A0A6YYC8 382 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 PNMA8CA0A1B0GUJ8 204 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 LOC100130705A0A1B0GUX0 176 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 ZNF587BE7ETH6 402 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 I3L1I5 382 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 IDH3BO43837 385 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 XPNPEP2O43895 674 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SRPX2O60687 465 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 B4GALT2O60909 372 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 KERAO60938 352 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 CRCPO75575 148 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SLC22A3O75751 556 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SCELO95171 688 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SNX4O95219 450 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 KRT75O95678 551 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 KRT6AP02538 564 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 KRT6BP04259 564 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 RPS17P08708 135 aaKnown RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 TRAPPC2P0DI81 140 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 TRAPPC2BP0DI82 140 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 UROSP10746 265 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 CD1DP15813 335 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 IL7RP16871 459 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 OGNP20774 298 aaKnown RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 OMGP23515 440 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 CASP3P42574 277 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 POLR2JP52435 117 aaKnown RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 DVL1P1P54792 670 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 CSNK2BP67870 215 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 PRKCDQ05655 676 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 CD47Q08722 323 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 RUNX2Q13950 521 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 POU6F1Q14863 301 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 RAB35Q15286 201 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SMU1Q2TAY7 513 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 XKR6Q5GH73 641 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 PAPPA-AS1Q5QFB9 102 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 LDLRAP1Q5SW96 308 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 DCST1Q5T197 706 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 FAM182AQ5T1J6 154 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 OTUD3Q5T2D3 398 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 MFSD4BQ5TF39 518 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 CLEC6AQ6EIG7 209 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 GLYATQ6IB77 296 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SULT1C3Q6IMI6 304 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 C11orf71Q6IPW1 123 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 ZNF544Q6NX49 715 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 TTC23LQ6PF05 361 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 PLD3Q8IV08 490 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 KIR3DL3Q8N743 410 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SYT14Q8NB59 555 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 NFAM1Q8NET5 270 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 IPMKQ8NFU5 416 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 KBTBD8Q8NFY9 601 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 RHOXF1Q8NHV9 184 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 MUC7Q8TAX7 377 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 ZCCHC10Q8TBK6 192 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 BRSK1Q8TDC3 778 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SECTM1Q8WVN6 248 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 TRIM63Q969Q1 353 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 C3orf30Q96M34 536 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 C1orf147Q96MC9 270 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 RNF145Q96MT1 663 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SERINC2Q96SA4 455 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 LPAR4Q99677 370 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SH3GL1Q99961 368 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 APOL2Q9BQE5 337 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 DGCR6LQ9BY27 220 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 NDEL1Q9GZM8 345 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SLIRPQ9GZT3 109 aaKnown RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 OR52A5Q9H2C5 316 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 DSN1Q9H410 356 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 DUSP21Q9H596 190 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 MID1IP1Q9NPA3 183 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 ADAP2Q9NPF8 381 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 SCN3BQ9NY72 215 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 ZNF224Q9NZL3 707 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 NFKBIL1Q9UBC1 381 aaPredicted RBP4.58□□□□□ -1.68
GYPB-212ENST00000511198 OSGIN1Q9UJX0 560 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 GRIP1Q9Y3R0 1128 aa4.58□□□□□ -1.68
GYPB-212ENST00000511198 A0A1W2PNV4 684 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms