RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF177Q13360 481 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FHL1Q13642 323 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM187Q14656 261 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 GNMTQ14749 295 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 EMC2Q15006 297 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 CYP51A1Q16850 503 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 KNOP1Q1ED39 458 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HNRNPA1L2Q32P51 320 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ALKBH6Q3KRA9 238 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM74A3Q4VXF1 159 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HIKESHIQ53FT3 197 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TEX44Q53QW1 395 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 BEX5Q5H9J7 111 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TCHHL1Q5QJ38 904 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PLCXD3Q63HM9 321 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 STUMQ69YW2 141 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM53AQ6NSI3 398 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 GUSBP11Q6P575 273 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF549Q6P9A3 640 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SASS6Q6UVJ0 657 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ENPP6Q6UWR7 440 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SCARA5Q6ZMJ2 495 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 Q6ZRP5 223 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 APTXQ7Z2E3 356 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 HDDC2Q7Z4H3 204 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 KIAA1328Q86T90 577 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SPATA24Q86W54 205 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 C17orf82Q86X59 251 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 GABRG1Q8N1C3 465 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR2L13Q8N349 312 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FBXL16Q8N461 479 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 METTL13Q8N6R0 699 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 STPG4Q8N801 248 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF491Q8N8L2 437 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR4F6Q8NGB9 312 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR5L2Q8NGL0 311 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM110BQ8TC76 370 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PCNPQ8WW12 178 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PSMG2Q969U7 264 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM159Q96B96 161 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 DNAJA3Q96EY1 480 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM80Q96HE8 168 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF479Q96JC4 524 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 C9orf85Q96MD7 179 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 CNN2Q99439 309 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 MCHR1Q99705 422 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 RBM4Q9BWF3 364 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAIM2Q9BWQ8 316 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLITRK2Q9H156 845 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 MMP28Q9H239 520 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR52A5Q9H2C5 316 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 BLZF1Q9H2G9 400 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 ANKRA2Q9H9E1 313 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 NMRAL1Q9HBL8 299 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 IL1RAPQ9NPH3 570 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 MEPEQ9NQ76 525 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 EXOSC3Q9NQT5 275 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 C20orf96Q9NUD7 363 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 LYARQ9NX58 379 aaKnown RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PDP1Q9P0J1 537 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SENP1Q9P0U3 644 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 PSMC3IPQ9P2W1 217 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 CLN8Q9UBY8 286 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 LCMT1Q9UIC8 334 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 RARRES3Q9UL19 164 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC9A8Q9Y2E8 581 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
CKS1BP2-201ENST00000497342 LOC100996750A0A140TA64 210 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 BTBD17A6NE02 478 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ARHGEF33A8MVX0 844 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 SUPT3HB4E1H0 165 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 HSBP1L1C9JCN9 74 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 NEDD8-MDP1E9PL57 170 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 BLOC1S5-TXNDC5H3BN57 136 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 GOLGA8SH3BPF8 625 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 K7ERQ8 282 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 P2RY10O00398 339 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CCL21O00585 134 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 DLGAP1O14490 977 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 NDUFAB1O14561 156 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF195O14628 629 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 DNAJB6O75190 326 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CSTAP01040 98 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 FGF1P05230 155 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ERCC1P07992 297 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 NGFRP08138 427 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 FCGR3AP08637 254 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 F7P08709 466 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 WNT2P09544 360 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 EZRP15311 586 aaKnown RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 GNB3P16520 340 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CCKARP32238 428 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CDH5P33151 784 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 MAGEA5P43359 124 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 XCR1P46094 333 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR1D4P47884 311 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TFPI2P48307 235 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 KCNJ3P48549 501 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC26A2P50443 739 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 DVL1P1P54792 670 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms