RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 NAXDQ8IW45 347 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 ZNRF4Q8WWF5 429 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 SPACA5Q96QH8 159 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 PFDN5Q99471 154 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 PRSS27Q9BQR3 290 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 Q9N2J8 555 aa8.96□□□□□ -0.97
ERCC3-208ENST00000491292 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.96□□□□□ -0.97
ERCC3-208ENST00000491292 TMEM218A2RU14 115 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 HIDE1A8MVS5 230 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 GSTZ1O43708 216 aaPredicted RBP8.96□□□□□ -0.98
ERCC3-208ENST00000491292 GALR3O60755 368 aaPredicted RBP8.96□□□□□ -0.98
ERCC3-208ENST00000491292 HPP00738 406 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 CPN1P15169 458 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 DPP4P27487 766 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ILF3Q12906 894 aaKnown RBP eCLIP8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ULK3Q6PHR2 472 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ABHD13Q7L211 337 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 SLC29A4Q7RTT9 530 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 KDM8Q8N371 416 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 GALNT16Q8N428 558 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ISOC2Q96AB3 205 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 SPACA7Q96KW9 195 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ZNF649Q9BS31 505 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 LHX6Q9UPM6 363 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 H7C417 338 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ABCD4O14678 606 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 PMS2P2O95744 297 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 PMP2P02689 132 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 CD53P19397 219 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 GPR143P51810 404 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 DUSP8Q13202 625 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 DHRS2Q13268 280 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 RUNX2Q13950 521 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 HNRNPA1L2Q32P51 320 aaKnown RBP8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ARHGAP11BQ3KRB8 267 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ELFN2Q5R3F8 820 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 PXKQ7Z7A4 578 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 ETFBKMTQ8IXQ9 262 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 SHISA5Q8N114 240 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 OR13C3Q8NGS6 347 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 RAB11FIP5Q9BXF6 653 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 EPHX3Q9H6B9 360 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 WDR76Q9H967 626 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 MTFP1Q9UDX5 166 aa8.96□□□□□ -0.98
ERCC3-208ENST00000491292 A0A1W2PQU0 124 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 HMSDA8MTL9 139 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SOX1O00570 391 aaPredicted RBP8.95□□□□□ -0.98
ERCC3-208ENST00000491292 CTSAP10619 480 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 ZNF823P16415 610 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 CXCR1P25024 350 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 NPBWR1P48145 328 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 TMEM31Q5JXX7 168 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 ACOT7LQ6ZUV0 252 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 TRAPPC6BQ86SZ2 158 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SYS1Q8N2H4 156 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 CSNK1A1LQ8N752 337 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 CAMKVQ8NCB2 501 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 MAFIPQ8WZ33 124 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SLC41A2Q96JW4 573 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SULT4A1Q9BR01 284 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SARGQ9BW04 601 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 PNO1Q9NRX1 252 aaKnown RBP8.95□□□□□ -0.98
ERCC3-208ENST00000491292 WDR90Q96KV7 1748 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 LOC285556D6RIA3 1793 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 CDC14CA4D256 554 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 OR6C76A6NM76 312 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SLC16A7O60669 478 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 GLI4P10075 376 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 NQO2P16083 231 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SERPINF1P36955 418 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 GPR18Q14330 331 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 IRF4Q15306 451 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 MLF2Q15773 248 aaPredicted RBP8.95□□□□□ -0.98
ERCC3-208ENST00000491292 C11orf87Q6NUJ2 197 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 FIGLAQ6QHK4 219 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 COX15Q7KZN9 410 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 ZNF550Q7Z398 422 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 OR4K17Q8NGC6 315 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 OR6K3Q8NGY3 331 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 NPRL2Q8WTW4 380 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 GAL3ST3Q96A11 431 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 OR8D2Q9GZM6 311 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 TLNRD1Q9H1K6 362 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 ZFP57Q9NU63 452 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 LRIT1Q9P2V4 623 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 KCNG2Q9UJ96 466 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 MED12Q93074 2177 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 IGKV1-8A0A0C4DH67 115 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 A0A1W2PPV9 198 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 LINC00587B1AMM8 73 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SLC33A1O00400 549 aaPredicted RBP8.95□□□□□ -0.98
ERCC3-208ENST00000491292 OGG1O15527 345 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 XRCC3O43542 346 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 HCRTR2O43614 444 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 SNAPC5O75971 98 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 S1PR1P21453 382 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 NPY4RP50391 375 aa8.95□□□□□ -0.98
ERCC3-208ENST00000491292 PPIAP62937 165 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms