RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 NEIL1Q96FI4 390 aaPredicted RBP7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 SLC41A3Q96GZ6 507 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 C3orf30Q96M34 536 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZIM3Q96PE6 472 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 TSPAN32Q96QS1 320 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 OR8B2Q96RD0 313 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 NUDT16L1Q9BRJ7 211 aaKnown RBP7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 ASPNQ9BXN1 380 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 SLC38A1Q9H2H9 487 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 RNF121Q9H920 327 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 MAN2C1Q9NTJ4 1040 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 THUMPD1Q9NXG2 353 aaKnown RBP7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 NINJ2Q9NZG7 142 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 PPP1R3CQ9UQK1 317 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 USH1CQ9Y6N9 552 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 COL7A1Q02388 2944 aa7.05□□□□□ -1.28
RN7SL239P-201ENST00000490061 MDFIC2A0A1B0GVS7 189 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 EXOC1LA0A1B0GW35 172 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CLDN24A6NM45 220 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CENPBD1B2RD01 187 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 E9PQ18 207 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 M0R082 166 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 PRB2P02812 416 aaPredicted RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 F13BP05160 661 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 VIMP08670 466 aaKnown RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 LINC00032P0C843 101 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CHI3L1P36222 383 aaPredicted RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ACAA2P42765 397 aaKnown RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 RPS5P46782 204 aaKnown RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CCT5P48643 541 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 MMP16P51512 607 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CLDN8P56748 225 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CD69Q07108 199 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 PUDPQ08623 228 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 BNIP2Q12982 314 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CDK5R2Q13319 367 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 PTGR1Q14914 329 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CHI3L2Q15782 390 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 KCNJ8Q15842 424 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZNF181Q2M3W8 571 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 KANK2Q63ZY3 851 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZNF774Q6NX45 483 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 TNFAIP8L2Q6P589 184 aaPredicted RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 HDDC2Q7Z4H3 204 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 KLBQ86Z14 1044 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 SKA3Q8IX90 412 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 KDM8Q8N371 416 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ICA1LQ8NDH6 482 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 HIPK4Q8NE63 616 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 OR4A15Q8NGL6 344 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 OR2T11Q8NH01 316 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZNF417Q8TAU3 575 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 DNAJA4Q8WW22 397 aaPredicted RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CFHR4Q92496 578 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 PHF21AQ96BD5 680 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZG16BQ96DA0 208 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 MARS2Q96GW9 593 aaKnown RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 COG8Q96MW5 612 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZNF587Q96SQ5 575 aaPredicted RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 B9D2Q9BPU9 175 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 PTDSS2Q9BVG9 487 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 GPR61Q9BZJ8 451 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ELOVL3Q9HB03 270 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 RAB18Q9NP72 206 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 TNFRSF19Q9NS68 423 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 TBCCD1Q9NVR7 557 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ASIC5Q9NY37 505 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 RPS6KB2Q9UBS0 482 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 CLN8Q9UBY8 286 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZMAT5Q9UDW3 170 aaKnown RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 MARCOQ9UEW3 520 aaPredicted RBP7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 IFT52Q9Y366 437 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 DNAJC15Q9Y5T4 150 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 DNAH3Q8TD57 4116 aa7.04□□□□□ -1.28
RN7SL239P-201ENST00000490061 IGHV3OR16-10A0A075B7F0 116 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 GMNCA6NCL1 334 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 TMEM247A6NEH6 219 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 LRRC30A6NM36 301 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 TMEM178BH3BS89 294 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 HMGN4O00479 90 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 NR2C1P13056 603 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 GSTM3P21266 225 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 GABRA5P31644 462 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 FGF12P61328 243 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 SEC61A1P61619 476 aaKnown RBP7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 HSF2Q03933 536 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 EGR3Q06889 387 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 FUT5Q11128 374 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZMYND11Q15326 602 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 FAM219BQ5XKK7 198 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 FAM91A1Q658Y4 838 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 ZNF771Q7L3S4 317 aaPredicted RBP7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 ALDH16A1Q8IZ83 802 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 FITM2Q8N6M3 262 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 PNLDC1Q8NA58 520 aaKnown RBP7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 FNDC5Q8NAU1 212 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 NPEPL1Q8NDH3 523 aa7.03□□□□□ -1.28
RN7SL239P-201ENST00000490061 OR6X1Q8NH79 312 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms