RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 FAM86B1Q8N7N1 296 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 FAM156AQ8NDB6 213 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 OR13C2Q8NGS9 318 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 OR51A7Q8NH64 312 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 TNFRSF13CQ96RJ3 184 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 KCNK17Q96T54 332 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 NMNAT1Q9HAN9 279 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-217ENST00000489072 DCAF13Q9NV06 445 aaKnown RBP21.56■■□□□ 1.04
HMGN1-217ENST00000489072 STX18Q9P2W9 335 aaKnown RBP21.56■■□□□ 1.04
HMGN1-217ENST00000489072 FBXL3Q9UKT7 428 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 ZNF346Q9UL40 294 aaKnown RBP21.56■■□□□ 1.04
HMGN1-217ENST00000489072 UGT2A1Q9Y4X1 527 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 FKBP7Q9Y680 259 aa21.56■■□□□ 1.04
HMGN1-217ENST00000489072 EFCAB9A8MZ26 197 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 ENTPD5O75356 428 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 FARS2O95363 451 aaKnown RBP21.55■■□□□ 1.04
HMGN1-217ENST00000489072 IGHMP01871 453 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 IGFBP1P08833 259 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-217ENST00000489072 SLC25A16P16260 332 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 CTXN1P60606 82 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 NRN1LQ496H8 165 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 ARL8BQ9NVJ2 186 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 NDUFAF4Q9P032 175 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 ARL2BPQ9Y2Y0 163 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 CMAHPQ9Y471 501 aa21.55■■□□□ 1.04
HMGN1-217ENST00000489072 VSTM5A8MXK1 200 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 CDC42EP2O14613 210 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 CSF3P09919 207 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 CDAP32320 146 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 GPR4P46093 362 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 RPL27P61353 136 aaKnown RBP21.54■■□□□ 1.04
HMGN1-217ENST00000489072 PPP2R2BQ00005 443 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 TAF11Q15544 211 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 FXNQ16595 210 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 SLC16A14Q7RTX9 510 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 OAFQ86UD1 273 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 CYP4Z1Q86W10 505 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 ZCCHC24Q8N2G6 241 aaKnown RBP21.54■■□□□ 1.04
HMGN1-217ENST00000489072 CLDN22Q8N7P3 220 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 SLC7A13Q8TCU3 470 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 C7orf34Q96L11 122 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 TSPAN32Q96QS1 320 aa21.54■■□□□ 1.04
HMGN1-217ENST00000489072 MRPL37Q9BZE1 423 aaKnown RBP21.54■■□□□ 1.04
HMGN1-217ENST00000489072 CD5LO43866 347 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 GLRXP35754 106 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 LOXL1Q08397 574 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-217ENST00000489072 CD47Q08722 323 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 TMEM53Q6P2H8 277 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 SLC25A47Q6Q0C1 308 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 DPPA2Q7Z7J5 298 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 LRRC18Q8N456 261 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 PAQR4Q8N4S7 273 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-217ENST00000489072 ZNF519Q8TB69 540 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 NSMAFQ92636 917 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 MRPL24Q96A35 216 aaKnown RBP21.53■■□□□ 1.04
HMGN1-217ENST00000489072 NABP1Q96AH0 204 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 ANKRD19PQ9H560 264 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 RNF121Q9H920 327 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 SMURF2Q9HAU4 748 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 TAGLN3Q9UI15 199 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 SPEF1Q9Y4P9 236 aa21.53■■□□□ 1.04
HMGN1-217ENST00000489072 SH3PXD2BA1X283 911 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 VWC2LB2RUY7 222 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 TP53P04637 393 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 MMP7P09237 267 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 ZNF26P17031 533 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 TCN1P20061 433 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 SLC9A3P48764 834 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 PDLIM4P50479 330 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 MRPS34P82930 218 aaKnown RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 VLDLRP98155 873 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 ANKDD1AQ495B1 522 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 SLC36A2Q495M3 483 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 PODNL1Q6PEZ8 512 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 TMPRSS11FQ6ZWK6 438 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 PGAM4Q8N0Y7 254 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 SLC30A7Q8NEW0 376 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 LRRC37BQ96QE4 947 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 ALG12Q9BV10 488 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 GORASP2Q9H8Y8 452 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 SIAEQ9HAT2 523 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 CD300AQ9UGN4 299 aa21.52■■□□□ 1.04
HMGN1-217ENST00000489072 FBXO9Q9UK97 447 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 SAMD4AQ9UPU9 718 aaKnown RBP21.52■■□□□ 1.04
HMGN1-217ENST00000489072 A0A1W2PRQ8 180 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 DIRAS1O95057 198 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 H1F0P07305 194 aaKnown RBP21.51■■□□□ 1.03
HMGN1-217ENST00000489072 CCL2P13500 99 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 HSD17B1P14061 328 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 MSX2P35548 267 aaPredicted RBP21.51■■□□□ 1.03
HMGN1-217ENST00000489072 GALK2Q01415 458 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 DGCR6Q14129 220 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 TMEM249Q2WGJ8 235 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 IQCCQ4KMZ1 466 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 GKAP1Q5VSY0 366 aaPredicted RBP21.51■■□□□ 1.03
HMGN1-217ENST00000489072 LRP11Q86VZ4 500 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 RAB1BQ9H0U4 201 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 SLC7A8Q9UHI5 535 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 V9GYQ6 96 aa21.51■■□□□ 1.03
HMGN1-217ENST00000489072 ADRA2AP08913 450 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms