RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ERCC1P07992 297 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 ANXA5P08758 320 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 CT62P0C5K7 136 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 MYL2P10916 166 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RORAP35398 523 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 NSG1P42857 185 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 SLC1A1P43005 524 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 VDAC2P45880 294 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 CX3CR1P49238 355 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 TMED10P49755 219 aaKnown RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 CCNHP51946 323 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 DLX1P56177 255 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 TAS2R19P59542 299 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 YWHAGP61981 247 aaKnown RBP eCLIP2.05□□□□□ -2.08
RFC4-213ENST00000489028 ALKBH6Q3KRA9 238 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 C22orf42Q6IC83 251 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 TMEM53Q6P2H8 277 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 CERS6Q6ZMG9 384 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 PRSS41Q7RTY9 318 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 TMEM135Q86UB9 458 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 PIANPQ8IYJ0 282 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 KATNAL2Q8IYT4 538 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 MICU2Q8IYU8 434 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 PDIK1LQ8N165 341 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 MS4A15Q8N5U1 240 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 ZNF557Q8N988 423 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 OR51G1Q8NGK1 321 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RHEBL1Q8TAI7 183 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 CXorf40AQ8TE69 158 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 ACOT11Q8WXI4 607 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 KIFAP3Q92845 792 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 SMARCD2Q92925 531 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 PEX13Q92968 403 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RIOK2Q9BVS4 552 aaKnown RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 ROGDIQ9GZN7 287 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RACGAP1Q9H0H5 632 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 FANCEQ9HB96 536 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RPRD1BQ9NQG5 326 aaKnown RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 GPATCH2LQ9NWQ4 482 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RBAKQ9NYW8 714 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 UXTQ9UBK9 157 aaPredicted RBP2.05□□□□□ -2.08
RFC4-213ENST00000489028 PLEKHG2Q9H7P9 1386 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 A0A0G2JLM5 398 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 A0A1B0GTQ1 180 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 A0A1W2PQ67 120 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 C12orf71A8MTZ7 269 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 SUPT3HB4E1H0 165 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 GOLGA8TH3BQL2 631 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 HUS1O60921 280 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 EEDO75530 441 aaKnown RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 TNFSF13O75888 250 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 ALDOBP05062 364 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 POLR2MP0CAP2 368 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 GZMAP12544 262 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CCNB1P14635 433 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 HPGDP15428 266 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 FMO3P31513 532 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 NAMPTP43490 491 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 UQCRFS1P47985 274 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CSNK1DP48730 415 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 MRPL19P49406 292 aaKnown RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 SSR4P51571 173 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 GPX6P59796 221 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 ADARB1P78563 741 aaKnown RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 TGFBR3Q03167 851 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 SPAG1Q07617 926 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 ZNF763Q0D2J5 394 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 MAB21L1Q13394 359 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CYTH1Q15438 398 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 HADHQ16836 314 aaKnown RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 FRMPD3Q5JV73 1810 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 GPR157Q5UAW9 335 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 TTC19Q6DKK2 380 aaPredicted RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 REEP3Q6NUK4 255 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 TTC23LQ6PF05 361 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 TMEM220Q6QAJ8 160 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 ZNF836Q6ZNA1 936 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 RALGPS2Q86X27 583 aaPredicted RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 IQCKQ8N0W5 287 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 C6orf223Q8N319 242 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 EID2Q8N6I1 236 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 OR9G1Q8NH87 305 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 ZNF721Q8TF20 911 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 FGF14Q92915 247 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 ISG20Q96AZ6 181 aaKnown RBP2.04□□□□□ -2.08
RFC4-213ENST00000489028 SGK3Q96BR1 496 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 TSG101Q99816 390 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 NRIP2Q9BQI9 281 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 TMEM246Q9BRR3 403 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 DNTTIP1Q9H147 329 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CLSTN2Q9H4D0 955 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 RNF167Q9H6Y7 350 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 SIAEQ9HAT2 523 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CCNB1IP1Q9NPC3 277 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CHRAC1Q9NRG0 131 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 QPCTLQ9NXS2 382 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 CALYQ9NYX4 217 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 GNPTGQ9UJJ9 305 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 SLC25A15Q9Y619 301 aa2.04□□□□□ -2.08
RFC4-213ENST00000489028 IGLV3-22A0A075B6J6 115 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms