RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 C16orf62Q7Z3J2 963 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 MIER2Q8N344 545 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 SLC22A24Q8N4F4 322 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 SLC25A36Q96CQ1 311 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 NPFFR1Q9GZQ6 430 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 LRMDAQ9H2I8 198 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 ZNF702PQ9H963 129 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 GCM1Q9NP62 436 aa9.7□□□□□ -0.86
USP11-208ENST00000480104 A0A1W2PRD5 423 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 A0A1W2PRF3 423 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 A0A1W2PRM7 423 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 MEGF11A6BM72 1044 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 PGRMC1O00264 195 aaKnown RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 FAAHO00519 579 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 TIMM8AO60220 97 aaPredicted RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 NPIPB7O75200 414 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 SUPT7LO94864 414 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 SEC31AO94979 1220 aaKnown RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 AHSA1O95433 338 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 ENO1P06733 434 aaKnown RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 FAHP16930 419 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 CCNOP22674 350 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 CHATP28329 748 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 ARF6P62330 175 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 PRB3Q04118 309 aaPredicted RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 UNC50Q53HI1 259 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 XKR7Q5GH72 579 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 TMEM53Q6P2H8 277 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 Q6ZR03 302 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 LHFPL2Q6ZUX7 228 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 SNX32Q86XE0 403 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 VRK2Q86Y07 508 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 OR6N1Q8NGY5 312 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 MFSD8Q8NHS3 518 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 ZNF420Q8TAQ5 688 aaPredicted RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 PNPT1Q8TCS8 783 aaKnown RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 SFXN5Q8TD22 340 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 OIT3Q8WWZ8 545 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 LRR1Q96L50 414 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 PRR25Q96S07 402 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 DDOQ99489 341 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 PTDSS2Q9BVG9 487 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 PCDHAC1Q9H158 963 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.69□□□□□ -0.86
USP11-208ENST00000480104 WDR45Q9Y484 360 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
USP11-208ENST00000480104 CFAP73A6NFT4 308 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 CHST1O43916 411 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 HLA-DOBP13765 273 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 ZNF26P17031 533 aaPredicted RBP9.68□□□□□ -0.86
USP11-208ENST00000480104 SDC1P18827 310 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 MAPK1P28482 360 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 FOXA1P55317 472 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 EPS8Q12929 822 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 CD276Q5ZPR3 534 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 CRIP3Q6Q6R5 217 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 C3orf62Q6ZUJ4 267 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 CYS1Q717R9 158 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 VMO1Q7Z5L0 202 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 PNLDC1Q8NA58 520 aaKnown RBP9.68□□□□□ -0.86
USP11-208ENST00000480104 PSMA8Q8TAA3 256 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 C8orf46Q8TAG6 207 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 OR5M11Q96RB7 305 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
USP11-208ENST00000480104 CCT7Q99832 543 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 BAIAP2L1Q9UHR4 511 aa9.68□□□□□ -0.86
USP11-208ENST00000480104 IQCMA0A1B0GVH7 501 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 A0A1B0GW55 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 M0R082 166 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 SEC22BO75396 215 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 CLIC3O95833 236 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 C6orf47O95873 294 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 PTHP01270 115 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4L2P0CJ85 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4L3P0CJ86 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4L5P0CJ88 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4L6P0CJ89 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4L7P0CJ90 424 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 UQCRBP14927 111 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 APLNRP35414 380 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 RPS5P46782 204 aaKnown RBP9.67□□□□□ -0.86
USP11-208ENST00000480104 SERPINB8P50452 374 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 CD83Q01151 205 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 FUT5Q11128 374 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 KIAA0040Q15053 153 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 ZNF678Q5SXM1 525 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 DUX4L9Q6RFH8 374 aaPredicted RBP9.67□□□□□ -0.86
USP11-208ENST00000480104 DCDC5Q6ZRR9 648 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 CADM2Q8N3J6 435 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 ZNF417Q8TAU3 575 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 NPRL2Q8WTW4 380 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 ISOC1Q96CN7 298 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 MAELQ96JY0 434 aaKnown RBP9.67□□□□□ -0.86
USP11-208ENST00000480104 TMEM237Q96Q45 408 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 ZNF587Q96SQ5 575 aaPredicted RBP9.67□□□□□ -0.86
USP11-208ENST00000480104 DCTN5Q9BTE1 182 aa9.67□□□□□ -0.86
USP11-208ENST00000480104 WNT10AQ9GZT5 417 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms