RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TRAPPC2P0DI81 140 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TRAPPC2BP0DI82 140 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 SFTPDP35247 375 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 FAUP35544 74 aaKnown RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 ACTA2P62736 377 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ACTG2P63267 376 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 PSG6Q00889 435 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 DUSP8Q13202 625 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ZNF169Q14929 603 aaPredicted RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 NSDHLQ15738 373 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 UBE2NLQ5JXB2 153 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 CD276Q5ZPR3 534 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ATRAIDQ6UW56 229 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TMEM151BQ8IW70 566 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 FAM86C1Q9NVL1 165 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TAS2R4Q9NYW5 299 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 CKLFQ9UBR5 152 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 MLXQ9UH92 298 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 DHDHQ9UQ10 334 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 CAMK2AQ9UQM7 478 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 RPH3AQ9Y2J0 694 aaPredicted RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 KIAA1671Q9BY89 1806 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 FREM2Q5SZK8 3169 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 B8ZZF3 427 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 DISC1C4P0D8 188 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 P2RY10O00398 339 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 PLPP2O43688 288 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 SLC6A9P48067 706 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ARFIP1P53367 373 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 LIMK1P53667 647 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ARFRP1Q13795 201 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 HNF4GQ14541 408 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 STK11Q15831 433 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 CLEC9AQ6UXN8 241 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 GSG1LQ6UXU4 331 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TMEM92Q6UXU6 159 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TMEM184AQ6ZMB5 413 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 Q6ZS52 159 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 LRRTM1Q86UE6 522 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 MCATQ8IVS2 390 aaKnown RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 OR2L13Q8N349 312 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ZNF615Q8N8J6 731 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 OR13C9Q8NGT0 318 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 SCMH1Q96GD3 660 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TSNAXQ99598 290 aaKnown RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 NXF5Q9H1B4 397 aaKnown RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 BANF2Q9H503 90 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 COPZ2Q9P299 210 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 COL6A3P12111 3177 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 A0A0J9YY10 115 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ALOX12BO75342 701 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 FBXO24O75426 580 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TACSTD2P09758 323 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 OR2T7P0C7T2 308 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 ZNF823P16415 610 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 RPL18Q07020 188 aaKnown RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 TNK1Q13470 666 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 COL28A1Q2UY09 1125 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 GLT8D1Q68CQ7 371 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TMEM81Q6P7N7 255 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TSSK4Q6SA08 328 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 TMUB2Q71RG4 321 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 STEAP2Q8NFT2 490 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 OR13C3Q8NGS6 347 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 OR2T27Q8NH04 317 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 SMIM4Q8WVI0 70 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 MRPL38Q96DV4 380 aaKnown RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 ZNF578Q96N58 590 aaPredicted RBP8.87□□□□□ -0.99
CMC1-209ENST00000477739 ANKRD19PQ9H560 264 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 EMC7Q9NPA0 242 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 IFT46Q9NQC8 304 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 GPR160Q9UJ42 338 aa8.87□□□□□ -0.99
CMC1-209ENST00000477739 SPTA1P02549 2419 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 A0A0G2JK05 382 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 RPL22L1Q6P5R6 122 aaKnown RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 PDZD9Q8IXQ8 264 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 OR6V1Q8N148 313 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 OR1J2Q8NGS2 313 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 KCNJ15Q99712 375 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 OR10A5Q9H207 317 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 HRH4Q9H3N8 390 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 AKAP7Q9P0M2 348 aaPredicted RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 CD207Q9UJ71 328 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 KANTRA0A1W2PQU2 76 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 SDCBPO00560 298 aaPredicted RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 CDK2AP1O14519 115 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 ZNF432O94892 652 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 WISP1O95388 367 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 CFL1P23528 166 aaKnown RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 CAPZA1P52907 286 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 FZD5Q13467 585 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 DMKNQ6E0U4 476 aaPredicted RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 RTN4RL2Q86UN3 420 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 BPIFB2Q8N4F0 458 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 SLC25A38Q96DW6 304 aa8.86□□□□□ -0.99
CMC1-209ENST00000477739 MRPL48Q96GC5 212 aaKnown RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 TOE1Q96GM8 510 aaKnown RBP8.86□□□□□ -0.99
CMC1-209ENST00000477739 GABRG3Q99928 467 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms