RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 RASSF2P50749 326 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF133P52736 654 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 PIGFQ07326 219 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 KEAP1Q14145 624 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 TAF11Q15544 211 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 ETFDHQ16134 617 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF672Q499Z4 452 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 C10orf128Q5T292 105 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 SLC25A47Q6Q0C1 308 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 KLHL17Q6TDP4 642 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 TMEM108Q6UXF1 575 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 PTCHD4Q6ZW05 846 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 SKA3Q8IX90 412 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 PIAS4Q8N2W9 510 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 ARIH2OSQ8N7S6 290 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 FANK1Q8TC84 345 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 GNPDA2Q8TDQ7 276 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 NSMAFQ92636 917 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF75AQ96N20 296 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 GPX7Q96SL4 187 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 PLA2G12AQ9BZM1 189 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 OR52D1Q9H346 318 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 EGLN3Q9H6Z9 239 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 REEP1Q9H902 201 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 OBP2BQ9NPH6 170 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 KRCC1Q9NPI7 259 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 TMEM38BQ9NVV0 291 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 B3GNT2Q9NY97 397 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CRNNQ9UBG3 495 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 SAMHD1Q9Y3Z3 626 aaKnown RBP8.44□□□□□ -1.06
HDAC3-208ENST00000476739 UGT2A1Q9Y4X1 527 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 IER3IP1Q9Y5U9 82 aa8.44□□□□□ -1.06
HDAC3-208ENST00000476739 CENPBD1B2RD01 187 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 E7EQL1 145 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 ATP6V1G2-DDX39BF2Z307 99 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SOCS2O14508 198 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 HS3ST1O14792 307 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 E2F6O75461 281 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 PPP1R3DO95685 299 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 IGLV1-44P01699 117 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 TP53P04637 393 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SCG5P05408 212 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SOD3P08294 240 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CD79AP11912 226 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CBR1P16152 277 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CALCRP30988 508 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 GIPRP48546 466 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 IDH3GP51553 393 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CD47Q08722 323 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 NPRL3Q12980 569 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 TSPAN31Q12999 210 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CCNIQ14094 377 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 MICAQ29983 383 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 PGGHGQ32M88 737 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 RFX4Q33E94 735 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SMARCD3Q6STE5 483 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SLC22A25Q6T423 547 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 DPY19L2P2Q6ZN68 376 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF620Q6ZNG0 422 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SSX8Q7RTT4 187 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 HS3ST5Q8IZT8 346 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SLC22A24Q8N4F4 322 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 AQP11Q8NBQ7 271 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 PAPD5Q8NDF8 572 aaKnown RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 OR8D4Q8NGM9 314 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 IGFBPL1Q8WX77 278 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 NINJ1Q92982 152 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 GTPBP3Q969Y2 492 aaKnown RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 NABP1Q96AH0 204 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 MS4A3Q96HJ5 214 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SAMD8Q96LT4 415 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 FOXN4Q96NZ1 517 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SLC38A2Q96QD8 506 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 NIPSNAP1Q9BPW8 284 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 ALG12Q9BV10 488 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 CISD1Q9NZ45 108 aaKnown RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 NDUFA13Q9P0J0 144 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 GRHPRQ9UBQ7 328 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 SCOCQ9UIL1 159 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 MOKQ9UQ07 419 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 MAGED1Q9Y5V3 778 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-208ENST00000476739 MAST4O15021 2626 aa8.43□□□□□ -1.06
HDAC3-208ENST00000476739 PRRC2AP48634 2157 aaKnown RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 ANKRD17O75179 2603 aaKnown RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 SLC22A23A1A5C7 686 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 A6NIZ1 184 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 TIPRLO75663 272 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 DANCRP0C864 163 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 CTLA4P16410 223 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 DNASE1P24855 282 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 SDHAP31040 664 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 IFNGR2P38484 337 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 PTDSS1P48651 473 aaKnown RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 CDH11P55287 796 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 RAP1BP61224 184 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 RAP1AP62834 184 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 NAAAQ02083 359 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms