RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C11orf98E9PRG8 122 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 KHNYNO15037 678 aaKnown RBP14.84□□□□□ -0.03
TMEM53-208ENST00000476724 TOX3O15405 576 aaPredicted RBP14.84□□□□□ -0.03
TMEM53-208ENST00000476724 FABP7O15540 132 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 OR6A2O95222 327 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 TIAF1O95411 115 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 IGHMP01871 453 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ADRB1P08588 477 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ANKRD34CP0C6C1 535 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 AVPR2P30518 371 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 MAGEB1P43366 347 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF528Q3MIS6 628 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 TMEM69Q5SWH9 247 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 POMZP3Q6PJE2 187 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 RABEPKQ7Z6M1 372 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ADGRG3Q86Y34 549 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 IZUMO1Q8IYV9 350 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF519Q8TB69 540 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 GPR119Q8TDV5 335 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 SLC25A36Q96CQ1 311 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 CCDC74BQ96LY2 380 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ARRDC1-AS1Q9H2J1 176 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 AUNIPQ9H7T9 357 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 VSX1Q9NZR4 365 aaPredicted RBP14.84□□□□□ -0.03
TMEM53-208ENST00000476724 SRPK3Q9UPE1 567 aa14.84□□□□□ -0.03
TMEM53-208ENST00000476724 ANXA2P2A6NMY6 339 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 GPR171O14626 319 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 GMFGO60234 142 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 PRAF2O60831 178 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 MT-ND4P03905 459 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 ANXA2P07355 339 aaKnown RBP14.83□□□□□ -0.03
TMEM53-208ENST00000476724 SOX2P48431 317 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 PTH2RP49190 550 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 CCR6P51684 374 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 FOXL2P58012 376 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 ACKR1Q16570 336 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 ELFN2Q5R3F8 820 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 C1orf140Q5VVS0 124 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 C1QL3Q5VWW1 255 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 ZNF767PQ75MW2 155 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 LUZP2Q86TE4 346 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 OR11H7Q8NGC8 314 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 OR6S1Q8NH40 331 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 TMEM234Q8WY98 164 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 NAT6Q93015 286 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 OR8B4Q96RC9 309 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 OR6C1Q96RD1 312 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 TGIF2Q9GZN2 237 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 HRASLSQ9HDD0 168 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 TAS2R10Q9NYW0 307 aa14.83□□□□□ -0.03
TMEM53-208ENST00000476724 A0A1B0GVI7 797 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 A6NL46 340 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.83□□□□□ -0.04
TMEM53-208ENST00000476724 ZNF593O00488 134 aaPredicted RBP14.83□□□□□ -0.04
TMEM53-208ENST00000476724 ALX3O95076 343 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 AHSA1O95433 338 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 ADRA2CP18825 462 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 CFPP27918 469 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 SLC26A5P58743 744 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 LAMTOR1Q6IAA8 161 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 PRSS58Q8IYP2 241 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 ZNF679Q8IYX0 411 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 SLC38A9Q8NBW4 561 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 OR52I2Q8NH67 350 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 C4orf45Q96LM5 186 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 ZNF222Q9UK12 451 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 HSPB11Q9Y547 144 aa14.83□□□□□ -0.04
TMEM53-208ENST00000476724 ACOT7O00154 380 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 HLA-DQA2P01906 255 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 SYPP08247 313 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 PSMB1P20618 241 aaKnown RBP14.82□□□□□ -0.04
TMEM53-208ENST00000476724 MPLP40238 635 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 CLDN12P56749 244 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 SLC17A1Q14916 467 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 SLC18B1Q6NT16 456 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 ZNF782Q6ZMW2 699 aaPredicted RBP14.82□□□□□ -0.04
TMEM53-208ENST00000476724 ZNF227Q86WZ6 799 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 GIMAP1Q8WWP7 306 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 ATOH1Q92858 354 aaPredicted RBP14.82□□□□□ -0.04
TMEM53-208ENST00000476724 MCHR2Q969V1 340 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 TMEM106AQ96A25 262 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 SLCO1C1Q9NYB5 712 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 RCE1Q9Y256 329 aa14.82□□□□□ -0.04
TMEM53-208ENST00000476724 ANKRD34BA5PLL1 514 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 PEX14O75381 377 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 CRABP1P29762 137 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 ROM1Q03395 351 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 TEX30Q5JUR7 227 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 KCTD18Q6PI47 426 aaPredicted RBP14.81□□□□□ -0.04
TMEM53-208ENST00000476724 TMPRSS12Q86WS5 348 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 PRSS35Q8N3Z0 413 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 ZNF248Q8NDW4 579 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 DUSP19Q8WTR2 217 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 C20orf85Q9H1P6 137 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 ELOVL3Q9HB03 270 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 SLC22A11Q9NSA0 550 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 STEAP1Q9UHE8 339 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 KCNG2Q9UJ96 466 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 WDR87Q6ZQQ6 2873 aa14.81□□□□□ -0.04
TMEM53-208ENST00000476724 ANKRD20A5PA0PJZ0 165 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms