RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 EIF5AP63241 154 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 TMEM115Q12893 351 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 ENPP2Q13822 863 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 RNF151Q2KHN1 245 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MST1LQ2TV78 715 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 AMZ1Q400G9 498 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 AARDQ4LEZ3 155 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TMEM31Q5JXX7 168 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FAM46CQ5VWP2 391 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 C9orf131Q5VYM1 1079 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 MRM1Q6IN84 353 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 C16orf59Q7L2K0 433 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF627Q7L945 461 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OVCH1Q7RTY7 1134 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CAMKMTQ7Z624 323 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 LRP11Q86VZ4 500 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ARL14Q8N4G2 192 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PCSK9Q8NBP7 692 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 SLC30A7Q8NEW0 376 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TERB2Q8NHR7 220 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ASB13Q8WXK3 278 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MR1Q95460 341 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 EID2BQ96D98 161 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZMYND19Q96E35 227 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 CDCA3Q99618 268 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 SLC12A9Q9BXP2 914 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 DPH1Q9BZG8 443 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FBXO44Q9H4M3 255 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZMAT3Q9HA38 289 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 IL26Q9NPH9 171 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZCCHC3Q9NUD5 404 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 CALML5Q9NZT1 146 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NCDNQ9UBB6 729 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 KCNG2Q9UJ96 466 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CHD3Q12873 2000 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 RIIAD1A6NNX1 92 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PRSS47A8MTI9 375 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HMGN4O00479 90 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TOX3O15405 576 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 CYB5BO43169 146 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 XRCC3O43542 346 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NME2P1O60361 137 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GLSO94925 669 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 SCAF4O95104 1147 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 AIFM1O95831 613 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PLGP00747 810 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 PRH1P02810 166 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TRGC2P03986 189 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CD14P08571 375 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 GIMD1P0DJR0 217 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 F3P13726 295 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 KCNE1P15382 129 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HNF1AP20823 631 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 DPP4P27487 766 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NDUFS1P28331 727 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 HOXD9P28356 352 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 PMELP40967 661 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TSFMP43897 325 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 RPL29P47914 159 aaKnown RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 LSSP48449 732 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 S100A10P60903 97 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PPP2CBP62714 309 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PPP2CAP67775 309 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TRA2AQ13595 282 aaKnown RBP eCLIP3.85□□□□□ -1.79
VPS50-210ENST00000471188 TMEM35AQ53FP2 167 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MESTQ5EB52 335 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 STPG1Q5TH74 334 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TANGO2Q6ICL3 276 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF343Q6P1L6 599 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 AGTRAPQ6RW13 159 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TMEM205Q6UW68 189 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF620Q6ZNG0 422 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 C17orf64Q86WR6 236 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 FAM129CQ86XR2 697 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 KDM8Q8N371 416 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ZNF664Q8N3J9 261 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 RFLNBQ8N5W9 214 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR6J1Q8NGC5 347 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR13C2Q8NGS9 318 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MITD1Q8WV92 249 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 ASB17Q8WXJ9 295 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MIB2Q96AX9 1013 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MOAP1Q96BY2 351 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CXorf40BQ96DE9 158 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SMIM19Q96E16 107 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SLC35G5Q96KT7 338 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 WDR92Q96MX6 357 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 PHB2Q99623 299 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
VPS50-210ENST00000471188 G6PC3Q9BUM1 346 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CFHR5Q9BXR6 569 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SNHG12Q9BXW3 62 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 SMIM3Q9BZL3 60 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR52A5Q9H2C5 316 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 OR52D1Q9H346 318 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 TAF9BQ9HBM6 251 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 CSNK1G1Q9HCP0 422 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 UBQLN4Q9NRR5 601 aa3.85□□□□□ -1.79
VPS50-210ENST00000471188 MED17Q9NVC6 651 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms