RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 LINC00299Q6ZSB3 139 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 STX19Q8N4C7 294 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 FNDC8Q8TC99 324 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 DNAJA4Q8WW22 397 aaPredicted RBP12.75□□□□□ -0.37
COL27A1-203ENST00000468565 TMEM45BQ96B21 275 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 TMEM204Q9BSN7 226 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 MALT1Q9UDY8 824 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 CADP27708 2225 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 EFCAB10A6NFE3 127 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ELOA3DA6NLF2 546 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 FZD7O75084 574 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 LYZL6O75951 148 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 VAMP5O95183 116 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 AHSA1O95433 338 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 LCKP06239 509 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 CD36P16671 472 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 HTR2AP28223 471 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 NTF4P34130 210 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 BMXP51813 675 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 FOXD4Q12950 439 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ELOA3BQ3SY89 546 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF704Q6ZNC4 412 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 PTCHD4Q6ZW05 846 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 LSRQ86X29 649 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 LINC00471Q8N535 108 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF433Q8N7K0 673 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ELOA3Q8NG57 546 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 MFSD8Q8NHS3 518 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 SLC38A4Q969I6 547 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 PIGTQ969N2 578 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 UBTD1Q9HAC8 227 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 SLC13A4Q9UKG4 626 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 OR10H3O60404 316 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 AKR7A3O95154 331 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 PNMTP11086 282 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 P2RY4P51582 365 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 RGS8P57771 180 aaPredicted RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 EGR4Q05215 589 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 C16orf87Q6PH81 154 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 SEZ6L2Q6UXD5 910 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 CASP12Q6UXS9 341 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF554Q86TJ5 538 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 UBE2J2Q8N2K1 259 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 PLEKHA8Q96JA3 519 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 FNDC11Q9BVV2 318 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ESRP2Q9H6T0 727 aaKnown RBP12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ASB6Q9NWX5 421 aa12.74□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
COL27A1-203ENST00000468565 FTCDNL1E5RQL4 147 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 IGHV3-9P01782 118 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 FUT4P22083 530 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 POU1F1P28069 291 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 NUDT6P53370 316 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF846Q147U1 533 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 ULK3Q6PHR2 472 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 TGIF2LYQ8IUE0 185 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 OR4D11Q8NGI4 311 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 TAS2R16Q9NYV7 291 aa12.73□□□□□ -0.37
COL27A1-203ENST00000468565 CNOT2Q9NZN8 540 aaKnown RBP12.73□□□□□ -0.37
COL27A1-203ENST00000468565 HEATR1Q9H583 2144 aaKnown RBP12.73□□□□□ -0.37
COL27A1-203ENST00000468565 A0A1W2PRQ8 180 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 OR2T1O43869 369 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 TGFBR2P37173 567 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 PPA1Q15181 289 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 SEC23BQ15437 767 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ALG10BQ5I7T1 473 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 TMEM236Q5W0B7 351 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 TMEM225Q6GV28 225 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 RBM45Q8IUH3 476 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 LRRC75A-AS1Q8N1F1 130 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 NDNFQ8TB73 568 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 S100ZQ8WXG8 99 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 MUCL1Q96DR8 90 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 Q96MT0 163 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ARHGDIGQ99819 225 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 POLR2J3Q9H1A7 115 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 TMEM27Q9HBJ8 222 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 HMG20AQ9NP66 347 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 AMBNQ9NP70 447 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 REV1Q9UBZ9 1251 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 A4GNTQ9UNA3 340 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 A0A0B4J2E0 115 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 A0A1B0GX12 115 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 OR5H1A6NKK0 313 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 EFCAB9A8MZ26 197 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 M0R3H8 397 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 FMO6PO60774 539 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 LGI1O95970 557 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms