RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ZNF346Q9UL40 294 aaKnown RBP5.06□□□□□ -1.6
LRCH3-212ENST00000466845 USP22Q9UPT9 525 aa5.06□□□□□ -1.6
LRCH3-212ENST00000466845 SLC6A5Q9Y345 797 aa5.06□□□□□ -1.6
LRCH3-212ENST00000466845 TAF1P21675 1872 aa5.06□□□□□ -1.6
LRCH3-212ENST00000466845 ANKRD36CQ5JPF3 1778 aa5.06□□□□□ -1.6
LRCH3-212ENST00000466845 WDR90Q96KV7 1748 aa5.06□□□□□ -1.6
LRCH3-212ENST00000466845 RIC1Q4ADV7 1423 aa5.06□□□□□ -1.6
LRCH3-212ENST00000466845 DICER1Q9UPY3 1922 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NPIPA5A0A0B4J1W7 369 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 A1L4Q6 167 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 LINC00862A6NCI5 91 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NPIPA5E9PKD4 350 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NPIPA3F8WFD2 350 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 BTN3A3O00478 584 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TPST2O60704 377 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SCO1O75880 301 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 CNIH1O95406 144 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 EGFP01133 1207 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 IGF2P01344 180 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 APRTP07741 180 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 HOXB7P09629 217 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 METTL15P1P0C7V9 234 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 FUT3P21217 361 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TBXA2RP21731 343 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ATP5A1P25705 553 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SSTR1P30872 391 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 CEACAM8P31997 349 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 AKR1C3P42330 323 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 PSMD8P48556 350 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NUMBP49757 651 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 GPR143P51810 404 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NAPAP54920 295 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 KRTAP10-11P60412 298 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ACVR1Q04771 509 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 MLLT11Q13015 90 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SKP2Q13309 424 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 DGUOKQ16854 277 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 DCAF4L1Q3SXM0 396 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SAMD4BQ5PRF9 694 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 RBM48Q5RL73 367 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SDHAF4Q5VUM1 108 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 UBE2UQ5VVX9 321 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 LIPKQ5VXJ0 399 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 WDR25Q64LD2 544 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SLC27A4Q6P1M0 643 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 FAHD1Q6P587 224 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ATRAIDQ6UW56 229 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 DRAM2Q6UX65 266 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 CREB3L2Q70SY1 520 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 LINGO2Q7L985 606 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TCF24Q7RTU0 167 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NUFIP2Q7Z417 695 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 MAVSQ7Z434 540 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ZC3HC1Q86WB0 502 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ZSCAN4Q8NAM6 433 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 INO80EQ8NBZ0 244 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 OR4F15Q8NGB8 312 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 OR1L6Q8NGR2 347 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 OR5AK3PQ8NH89 298 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 MBD3L2Q8NHZ7 208 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SFT2D1Q8WV19 159 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 FAF2Q96CS3 445 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 C10orf35Q96D05 121 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 CPNE2Q96FN4 548 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 CBWD1Q9BRT8 395 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 C1QTNF5Q9BXJ0 243 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 MRPS26Q9BYN8 205 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SLC39A8Q9C0K1 460 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 LAT2Q9GZY6 243 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ING2Q9H160 280 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SYT4Q9H2B2 425 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 ARMC7Q9H6L4 198 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 DCLRE1BQ9H816 532 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 IL1RL2Q9HB29 575 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 AGPAT4Q9NRZ5 378 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 B3GNT2Q9NY97 397 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 SEC14L4Q9UDX3 406 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TRMT112Q9UI30 125 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 NPIPA1Q9UND3 350 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TFR2Q9UP52 801 aa5.05□□□□□ -1.6
LRCH3-212ENST00000466845 FARSAQ9Y285 508 aaKnown RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 HEMK1Q9Y5R4 338 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-212ENST00000466845 TBC1D3DA0A087WVF3 549 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 TBC1D3IA0A087WXS9 549 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 PSMB11A5LHX3 300 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 TBC1D3BA6NDS4 549 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 IGLON5A6NGN9 336 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 TBC1D3LB9A6J9 549 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 M0QZ24 198 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 SIGLEC5O15389 551 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 RAD1O60671 282 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 SLC19A2O60779 497 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 RNASEH1O60930 286 aaKnown RBP5.04□□□□□ -1.6
LRCH3-212ENST00000466845 SCGNO76038 276 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 SUPT7LO94864 414 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 PAK4O96013 591 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-212ENST00000466845 ORM1P02763 201 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 TBC1D3HP0C7X1 549 aa5.04□□□□□ -1.6
LRCH3-212ENST00000466845 DANCRP0C864 163 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms