RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 OR13C3Q8NGS6 347 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 FAM131CQ96AQ9 280 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 SLC25A44Q96H78 314 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-213ENST00000454468 OR1F2PQ96R84 312 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 CLEC4MQ9H2X3 399 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-213ENST00000454468 GAREM1Q9H706 876 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 DIABLOQ9NR28 239 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 PATE3B3GLJ2 98 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 TEX46H3BTG2 121 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 UBL3O95164 117 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 TIAF1O95411 115 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 SIX6O95475 246 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 BIDP55957 195 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 CCL7P80098 99 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 LRRC37A5PQ49AS3 106 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 EEF1A1P5Q5VTE0 462 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 KCTD18Q6PI47 426 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-213ENST00000454468 STAC2Q6ZMT1 411 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 GLB1L2Q8IW92 636 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 SLC38A9Q8NBW4 561 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 TMEM234Q8WY98 164 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 DUSP15Q9H1R2 295 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-213ENST00000454468 SDHAF3Q9NRP4 125 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 FRRS1LQ9P0K9 344 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
SMPD4-213ENST00000454468 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 TRAV8-7A0A075B6U6 113 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 A0A1W2PR77 199 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 RBBP9O75884 186 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 DNASE1P24855 282 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 DDOSTP39656 456 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 SLC6A8P48029 635 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 P2RX3P56373 397 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 FOXK1P85037 733 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 IFITM2Q01629 132 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 CFHR1Q03591 330 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 GLO1Q04760 184 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 FAPQ12884 760 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 MAMSTRQ6ZN01 415 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 DCXRQ7Z4W1 244 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF101Q8IZC7 436 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 OR2G2Q8NGZ5 317 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 B9D1Q9UPM9 204 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 MMACHCQ9Y4U1 282 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 TMEM269A0A1B0GVZ9 245 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 P2RY10O00398 339 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 SEC14L5O43304 696 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 SIGLEC6O43699 453 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 GMDSO60547 372 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 KDM4BO94953 1096 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 DDAH2O95865 285 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 PLATP00750 562 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 MAPK3P27361 379 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 LIMK1P53667 647 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 BDH1Q02338 343 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 ATXN7L3Q14CW9 347 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 TMEM176BQ3YBM2 270 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF721Q8TF20 911 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 RBP7Q96R05 134 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 TIMP4Q99727 224 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 METTL17Q9H7H0 456 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 ABRACLQ9P1F3 81 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 KLHL13Q9P2N7 655 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 MGAT4CQ9UBM8 478 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 FBXL3Q9UKT7 428 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 FRG2CA6NGY1 282 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 HSD11B1P28845 292 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 POLR2HP52434 150 aaKnown RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 TSPAN5P62079 268 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 FZD5Q13467 585 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 CDK10Q15131 360 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 PPP1R3BQ86XI6 285 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 ACBD4Q8NC06 268 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 OR1N1Q8NGS0 311 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 KIAA1143Q96AT1 154 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 FAM71F1Q96KD3 344 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
SMPD4-213ENST00000454468 RALGAPA1Q6GYQ0 2036 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 DNAJC13O75165 2243 aa10.82□□□□□ -0.68
SMPD4-213ENST00000454468 CELSR3Q9NYQ7 3312 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 A8MVM7 634 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ARPC3O15145 178 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 PIN1P1O15428 100 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ANKRD34CP0C6C1 535 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ANXA3P12429 323 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 CXCL3P19876 107 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 AKR1D1P51857 326 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 CLRN1P58418 232 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 EFR3AQ14156 821 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 RAET1LQ5VY80 246 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF578Q96N58 590 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 EMC7Q9NPA0 242 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 WDFY4Q6ZS81 3184 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 COL6A3P12111 3177 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms