RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TEKQ02763 1124 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 PLP2Q04941 152 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 NFYCQ13952 458 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 SELPLGQ14242 412 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 MOGQ16653 247 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 SHQ1Q6PI26 577 aaKnown RBP12.74□□□□□ -0.37
MSH5-208ENST00000429846 RETREG3Q86VR2 466 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 RBM45Q8IUH3 476 aaKnown RBP12.74□□□□□ -0.37
MSH5-208ENST00000429846 LRRC17Q8N6Y2 441 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 RBM15BQ8NDT2 890 aaKnown RBP12.74□□□□□ -0.37
MSH5-208ENST00000429846 OR4D11Q8NGI4 311 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 SYNPRQ8TBG9 265 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 C11orf40Q8WZ69 217 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 MCHR2Q969V1 340 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 TAMM41Q96BW9 452 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 SEPHS2Q99611 448 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 NARFLQ9H6Q4 476 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 METTL17Q9H7H0 456 aaPredicted RBP12.74□□□□□ -0.37
MSH5-208ENST00000429846 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
MSH5-208ENST00000429846 TRAV20A0A0B4J274 112 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 NPIPB13A6NJU9 1138 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 NPIPB4C9JG80 1138 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 BLOC1S5-TXNDC5H3BN57 136 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 MT-ND1P03886 318 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 LCKP06239 509 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 RBM34P42696 430 aaKnown RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 DAP3P51398 398 aaKnown RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 UCP2P55851 309 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 MYBPC1Q00872 1141 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 RPL18Q07020 188 aaKnown RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 VMACQ2NL98 169 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 C10orf128Q5T292 105 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 CCDC80Q76M96 950 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 TSPYL5Q86VY4 417 aaPredicted RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 CARM1Q86X55 608 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 PAQR4Q8N4S7 273 aaPredicted RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 OR10A6Q8NH74 314 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 PRSS27Q9BQR3 290 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 MRPL13Q9BYD1 178 aaKnown RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 OCEL1Q9H607 264 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 SMURF2Q9HAU4 748 aa12.73□□□□□ -0.37
MSH5-208ENST00000429846 MEPEQ9NQ76 525 aaPredicted RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 INTS9Q9NV88 658 aaKnown RBP12.73□□□□□ -0.37
MSH5-208ENST00000429846 GMNCA6NCL1 334 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 CLPTM1O96005 669 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 PNPP00491 289 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 MMP7P09237 267 aaPredicted RBP12.72□□□□□ -0.37
MSH5-208ENST00000429846 CCL2P13500 99 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 APLNRP35414 380 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 CRYBB2P43320 205 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 MAGEB1P43366 347 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 LMO4P61968 165 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 CCL8P80075 99 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 MRPS34P82930 218 aaKnown RBP12.72□□□□□ -0.37
MSH5-208ENST00000429846 ALKBH6Q3KRA9 238 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 TTMPQ5BVD1 217 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 UNQ6126/PRO20091Q6UXV3 157 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 SEMA6DQ8NFY4 1073 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 ASB10Q8WXI3 467 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 RAB39BQ96DA2 213 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 MAGEB18Q96M61 343 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 LRRC37BQ96QE4 947 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 ZNF347Q96SE7 839 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 SH3GL1Q99961 368 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 KCNN2Q9H2S1 579 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 SIAEQ9HAT2 523 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 LPAR2Q9HBW0 351 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 INIPQ9NRY2 104 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 MRGBPQ9NV56 204 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 TREM2Q9NZC2 230 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 BAG5Q9UL15 447 aa12.72□□□□□ -0.37
MSH5-208ENST00000429846 IGHV1-69-2A0A0G2JMI3 117 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 WNT9BO14905 357 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 TRMUO75648 421 aaKnown RBP12.71□□□□□ -0.37
MSH5-208ENST00000429846 OR7A10O76100 309 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 OR5F1O95221 314 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 F13BP05160 661 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 ACADSP16219 412 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 DRD4P21917 467 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 GZMMP51124 257 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 CRYBA2P53672 197 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 UGT2B15P54855 530 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 TAS2R41P59536 307 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 ERVS71-1P61550 626 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 HSF2Q03933 536 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 CYLC2Q14093 348 aaPredicted RBP12.71□□□□□ -0.37
MSH5-208ENST00000429846 FAM209AQ5JX71 171 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 METTL21CQ5VZV1 264 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 C12orf54Q6X4T0 127 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 C1orf174Q8IYL3 243 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.37
MSH5-208ENST00000429846 ZNF418Q8TF45 676 aaPredicted RBP12.71□□□□□ -0.37
MSH5-208ENST00000429846 LIPHQ8WWY8 451 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 SGTBQ96EQ0 304 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 ZNF665Q9H7R5 613 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 SAP30LQ9HAJ7 183 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 CCNB1IP1Q9NPC3 277 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms