RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 SLC6A5Q9Y345 797 aa12.84□□□□□ -0.35
TPM3P9-201ENST00000424846 CEP290O15078 2479 aa12.84□□□□□ -0.35
TPM3P9-201ENST00000424846 A0A1B0GTQ1 180 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 FGF2P09038 288 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 PPP3CBP16298 524 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 UBE2IP63279 158 aaKnown RBP12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 SQSTM1Q13501 440 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 ISXQ2M1V0 245 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 OR10K2Q6IF99 312 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 TSSK4Q6SA08 328 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 GALNT16Q8N428 558 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 ZNF615Q8N8J6 731 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 C4orf45Q96LM5 186 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 GABRG3Q99928 467 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 GRHPRQ9UBQ7 328 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 UBE2QL1A1L167 161 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 TUBAL3A6NHL2 446 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 ALOX12BO75342 701 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 CTRB1P17538 263 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 ZNF273Q14593 569 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 NR0B2Q15466 257 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 LY6G6FQ5SQ64 297 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 C11orf88Q6PI97 169 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 OVCH2Q7RTZ1 564 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 CLEC1AQ8NC01 280 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 BVESQ8NE79 360 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 OR6N1Q8NGY5 312 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 GPR148Q8TDV2 347 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 TSEN15Q8WW01 171 aaKnown RBP12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 DGAT2Q96PD7 388 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 PBX4Q9BYU1 374 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 TINAGL1Q9GZM7 467 aaPredicted RBP12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 POFUT1Q9H488 388 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 EXO5Q9H790 373 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 PRTFDC1Q9NRG1 225 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 LRP4O75096 1905 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 PCDH15Q96QU1 1955 aa12.83□□□□□ -0.36
TPM3P9-201ENST00000424846 HMSDA8MTL9 139 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 NAT1P18440 290 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 HNRNPA2B1P22626 353 aaKnown RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MAOBP27338 520 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 CSF2RBP32927 897 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 SKP2Q13309 424 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MEP1BQ16820 701 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 ARHGAP40Q5TG30 622 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 FNDC7Q5VTL7 733 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 HERVK_113Q902F9 699 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 G6PC3Q9BUM1 346 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 ELOVL3Q9HB03 270 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 APMAPQ9HDC9 416 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 RABL2AQ9UBK7 228 aaPredicted RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 CGGBP1Q9UFW8 167 aaPredicted RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 RABL2BQ9UNT1 228 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 KIF26BQ2KJY2 2108 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 PRAMEF2O60811 474 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MAPK3P27361 379 aaPredicted RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 CENPAP49450 140 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MFGE8Q08431 387 aaPredicted RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 BEX5Q5H9J7 111 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 NDUFAF7Q7L592 441 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MCATQ8IVS2 390 aaKnown RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 FAM3DQ96BQ1 224 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 ARPC5LQ9BPX5 153 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 NRSN2Q9GZP1 204 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MFFQ9GZY8 342 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 CDC14CA4D256 554 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 HOXC4P09017 264 aaPredicted RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 TACR3P29371 465 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MPGP29372 298 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 BOLLQ8N9W6 283 aaKnown RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 OR51A2Q8NGJ7 313 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 FAM174AQ8TBP5 190 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 MRPS24Q96EL2 167 aaKnown RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 NXF5Q9H1B4 397 aaKnown RBP12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 ATG5Q9H1Y0 275 aa12.82□□□□□ -0.36
TPM3P9-201ENST00000424846 CCSO14618 274 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 BET1O15155 118 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 CSN2P05814 226 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 RNH1P13489 461 aaKnown RBP12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 C4BPBP20851 252 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 FNTBP49356 437 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 BAMBIQ13145 260 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 MOGAT2Q3SYC2 334 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 EEF1A1P5Q5VTE0 462 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 STEAP1BQ6NZ63 245 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 CDH26Q8IXH8 852 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 FAM160A2Q8N612 972 aaPredicted RBP12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 OR5M9Q8NGP3 310 aa12.81□□□□□ -0.36
TPM3P9-201ENST00000424846 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms