RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 GINS4Q9BRT9 223 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 KCNK15Q9H427 330 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 GPR27Q9NS67 375 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 ZNF224Q9NZL3 707 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 KCNN3Q9UGI6 736 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 TEX51A0A1B0GUA7 166 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 MEIS3P1A6NDR6 274 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 CTAG2O75638 210 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 RGS11O94810 467 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 WISP1O95388 367 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 PLGP00747 810 aaPredicted RBP13.54□□□□□ -0.24
TTC39A-208ENST00000413473 RLN1P04808 185 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 CCKBRP32239 447 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 RORAP35398 523 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 FAUP35544 74 aaKnown RBP13.54□□□□□ -0.24
TTC39A-208ENST00000413473 POU3F4P49335 361 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 BIVMQ86UB2 503 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 FAM160A2Q8N612 972 aaPredicted RBP13.54□□□□□ -0.24
TTC39A-208ENST00000413473 SLC25A36Q96CQ1 311 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 OMA1Q96E52 524 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 LAT2Q9GZY6 243 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 LANCL2Q9NS86 450 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
TTC39A-208ENST00000413473 GTF2A1LQ9UNN4 478 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 SLC22A13Q9Y226 551 aa13.54□□□□□ -0.24
TTC39A-208ENST00000413473 TRAV18A0A075B6X5 111 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 B8ZZF3 427 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 MCRIP1C9JLW8 97 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 TPPPO94811 219 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 KDM4BO94953 1096 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 SIX6O95475 246 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 ITGA5P08648 1049 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 FREM3P0C091 2139 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 C4BPBP20851 252 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-208ENST00000413473 OR1D4P47884 311 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
TTC39A-208ENST00000413473 WDR45BQ5MNZ6 344 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 C3P1Q6ZMU1 363 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 SLC36A1Q7Z2H8 476 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 RELTQ969Z4 430 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 NKX3-1Q99801 234 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-208ENST00000413473 SPEF1Q9Y4P9 236 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 H0YIG0 161 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 XKRYO14609 159 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 NUDT14O95848 222 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 BGLAPP02818 100 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 SCAND1P57086 179 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 C2orf68Q2NKX9 166 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 SMUG1Q53HV7 270 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 FAM198BQ6UWH4 519 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 TTLL10Q6ZVT0 673 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 MARCH3Q86UD3 253 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 OR5M1Q8NGP8 315 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-208ENST00000413473 C8orf33Q9H7E9 229 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-208ENST00000413473 RDH8Q9NYR8 311 aa13.53□□□□□ -0.24
TTC39A-208ENST00000413473 SDK1Q7Z5N4 2213 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 UBE2MP61081 183 aaKnown RBP13.52□□□□□ -0.24
TTC39A-208ENST00000413473 CCINQ13939 588 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 SLC17A1Q14916 467 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 NHLRC3Q5JS37 347 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 BPHLQ86WA6 291 aaPredicted RBP13.52□□□□□ -0.24
TTC39A-208ENST00000413473 METTL21AQ8WXB1 218 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 RLN3Q8WXF3 142 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 ADIPOR1Q96A54 375 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 OR8B4Q96RC9 309 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 PDE7BQ9NP56 450 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 TAS2R8Q9NYW2 309 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 NUP50Q9UKX7 468 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 B9D1Q9UPM9 204 aa13.52□□□□□ -0.24
TTC39A-208ENST00000413473 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 A0A1W2PPC4 97 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 UBE2QL1A1L167 161 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 FRG2CA6NGY1 282 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 PHYHO14832 338 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 PNPP00491 289 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 CSF1P09603 554 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 GTF2F2P13984 249 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 FASLGP48023 281 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 DLX5P56178 289 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 H2BFSP57053 126 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 MFSD13AQ14CX5 517 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 SFRP5Q5T4F7 317 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 NKAIN2Q5VXU1 208 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 Q6ZS52 159 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 NUP54Q7Z3B4 507 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-208ENST00000413473 OR51S1Q8NGJ8 323 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 OIT3Q8WWZ8 545 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 FAM3DQ96BQ1 224 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 TMPRSS13Q9BYE2 586 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 C12orf10Q9HB07 376 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.25
TTC39A-208ENST00000413473 LAMA1P25391 3075 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.25
TTC39A-208ENST00000413473 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
TTC39A-208ENST00000413473 POU3F2P20265 443 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms