RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR9K2Q8NGE7 335 aa12.52□□□□□ -0.4
GPNMB-203ENST00000409458 SNX33Q8WV41 574 aa12.52□□□□□ -0.4
GPNMB-203ENST00000409458 TMEM203Q969S6 136 aa12.52□□□□□ -0.4
GPNMB-203ENST00000409458 SLC25A44Q96H78 314 aaPredicted RBP12.52□□□□□ -0.4
GPNMB-203ENST00000409458 ZNF845Q96IR2 970 aaPredicted RBP12.52□□□□□ -0.4
GPNMB-203ENST00000409458 SMAD5Q99717 465 aaKnown RBP12.52□□□□□ -0.4
GPNMB-203ENST00000409458 TRIM36Q9NQ86 728 aa12.52□□□□□ -0.4
GPNMB-203ENST00000409458 QPCTLQ9NXS2 382 aa12.52□□□□□ -0.4
GPNMB-203ENST00000409458 GRIP1Q9Y3R0 1128 aa12.52□□□□□ -0.4
GPNMB-203ENST00000409458 TNRC6AQ8NDV7 1962 aaKnown RBP12.52□□□□□ -0.41
GPNMB-203ENST00000409458 NPIPA2E9PIF3 369 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 NPIPA3F8WFD2 350 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ACOT7O00154 380 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 VAMP5O95183 116 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 MPZL1O95297 269 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 GAAP10253 952 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 CELP19835 753 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 PSMA1P25786 263 aaKnown RBP12.51□□□□□ -0.41
GPNMB-203ENST00000409458 GABRA5P31644 462 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 BLVRAP53004 296 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 HSF2Q03933 536 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 MEP1BQ16820 701 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ABLIM2Q6H8Q1 611 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 RPTNQ6XPR3 784 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 DPY19L4Q7Z388 723 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 SYS1Q8N2H4 156 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ROBO4Q8WZ75 1007 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 NSMAFQ92636 917 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 PELI1Q96FA3 418 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ADAD1Q96M93 576 aaKnown RBP12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
GPNMB-203ENST00000409458 TM9SF2Q99805 663 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ACOXLQ9NUZ1 547 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 GNG8Q9UK08 70 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ING1Q9UK53 422 aaPredicted RBP12.51□□□□□ -0.41
GPNMB-203ENST00000409458 MSRB2Q9Y3D2 182 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 PSMD9O00233 223 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 KHDRBS3O75525 346 aaKnown RBP12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF708P17019 499 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 GLO1Q04760 184 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 SRYQ05066 204 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 SLC26A10Q8NG04 563 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 DCSTAMPQ9H295 470 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 ACKR4Q9NPB9 350 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 LAMP5Q9UJQ1 280 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
GPNMB-203ENST00000409458 TRAV17A0A0B4J275 112 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF726A6NNF4 738 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF716A6NP11 495 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF593O00488 134 aaPredicted RBP12.5□□□□□ -0.41
GPNMB-203ENST00000409458 SPARCP09486 303 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ALOX5APP20292 161 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 UGT2B10P36537 528 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ENTPD1P49961 510 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ADAM8P78325 824 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 SLC10A1Q14973 349 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 HIST3H3Q16695 136 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 THEM4Q5T1C6 240 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 PDSS1Q5T2R2 415 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 LRRC69Q6ZNQ3 347 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 USP43Q70EL4 1123 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 OTOSQ8NHW6 89 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ABTB1Q969K4 478 aaPredicted RBP12.5□□□□□ -0.41
GPNMB-203ENST00000409458 CPNE4Q96A23 557 aaPredicted RBP12.5□□□□□ -0.41
GPNMB-203ENST00000409458 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
GPNMB-203ENST00000409458 RBP7Q96R05 134 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 OR2M2Q96R28 347 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 DCLRE1CQ96SD1 692 aaKnown RBP12.5□□□□□ -0.41
GPNMB-203ENST00000409458 AMELYQ99218 206 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 MNTQ99583 582 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 TMED9Q9BVK6 235 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 SF3B5Q9BWJ5 86 aaKnown RBP12.5□□□□□ -0.41
GPNMB-203ENST00000409458 DEFB127Q9H1M4 99 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 ST6GALNAC2Q9UJ37 374 aa12.5□□□□□ -0.41
GPNMB-203ENST00000409458 OR8G3PP0DMU2 310 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 PSMB10P40306 273 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 CAPZA2P47755 286 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 SERPINB10P48595 397 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 TAS2R43P59537 309 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 FABP5Q01469 135 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 SLC25A47Q6Q0C1 308 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 ARL9Q6T311 187 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 GDPGP1Q6ZNW5 385 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 SPACA3Q8IXA5 215 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 TMEM123Q8N131 208 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 KBTBD8Q8NFY9 601 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 MCHR2Q969V1 340 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 TXNL4BQ9NX01 149 aaKnown RBP12.49□□□□□ -0.41
GPNMB-203ENST00000409458 MRM2Q9UI43 246 aaKnown RBP12.49□□□□□ -0.41
GPNMB-203ENST00000409458 SSR3Q9UNL2 185 aa12.49□□□□□ -0.41
GPNMB-203ENST00000409458 CYTIPO60759 359 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms