RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 RASL11BQ9BPW5 248 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ERVK-6Q9BXR3 956 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 EDEM3Q9BZQ6 932 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 CDH19Q9H159 772 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TSPY26PQ9H489 355 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 RNF121Q9H920 327 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF286AQ9HBT8 521 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 DMAP1Q9NPF5 467 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 RBM22Q9NW64 420 aaKnown RBP eCLIP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 KLHL28Q9NXS3 571 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TVP23BQ9NYZ1 205 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 DBF4Q9UBU7 674 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC2A6Q9UGQ3 507 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 NARFQ9UHQ1 456 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 PSORS1C1Q9UIG5 152 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 NDRG2Q9UN36 371 aaKnown RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRAPPC4Q9Y296 219 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SNURFQ9Y675 71 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 U3KQV3 271 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 MYH14Q7Z406 1995 aaKnown RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 NRXN3Q9Y4C0 1643 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 GRIN2AQ12879 1464 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 WDR7Q9Y4E6 1490 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 GLI3P10071 1580 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 A0A0J9YX75 114 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 A0A1W2PP18 115 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR5H15A6NDH6 313 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 ARRDC5A6NEK1 342 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF98A6NK75 572 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 H0Y626 953 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 H3BRN7 92 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 TNFRSF11BO00300 401 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC28A1O00337 649 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 TAPBPO15533 448 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 HCRTR2O43614 444 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SURF6O75683 361 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 CDS2O95674 445 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 AP2A1O95782 977 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 PAHP00439 452 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 GP1BAP07359 652 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 HTR1AP08908 422 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 TNP1P09430 55 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF735P0CB33 412 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACTN1P12814 892 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 GABRA1P14867 456 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 GOT1P17174 413 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 BGNP21810 368 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 GABRA3P34903 492 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 CA5AP35218 305 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 RFX3P48380 749 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 NMUP48645 174 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 PSMD4P55036 377 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 DLX1P56177 255 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 RELAQ04206 551 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC38A11Q08AI6 406 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 FRG1Q14331 258 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 EMC2Q15006 297 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 PAFAH1B3Q15102 231 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 PSG5Q15238 335 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 LINC01620Q4KN68 170 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 FRMPD2BQ6IN97 320 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 KLHL10Q6JEL2 608 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 PAQR7Q86WK9 346 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 C17orf64Q86WR6 236 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 COA5Q86WW8 74 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPS19BP1Q86WX3 136 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 VSTM4Q8IW00 320 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 CCDC60Q8IWA6 550 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SCYL3Q8IZE3 742 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 MCOLN2Q8IZK6 566 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 WDTC1Q8N5D0 677 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 C3orf22Q8N5N4 141 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR2C3Q8N628 320 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 NPWQ8N729 165 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 TC2NQ8N9U0 490 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 POGLUT1Q8NBL1 392 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF740Q8NDX6 193 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 FBXO36Q8NEA4 188 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR4A15Q8NGL6 344 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR5W2Q8NH69 310 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZCCHC10Q8TBK6 192 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 RNF139Q8WU17 664 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 CT55Q8WUE5 264 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 FAM151AQ8WW52 585 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 NDRG1Q92597 394 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 RNASE6Q93091 150 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SMARCE1Q969G3 411 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 MOAP1Q96BY2 351 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 L3HYPDHQ96EM0 354 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 CXorf58Q96LI9 332 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SRXN1Q9BYN0 137 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 HAUS4Q9H6D7 363 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 AUNIPQ9H7T9 357 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SPC25Q9HBM1 224 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 TM9SF3Q9HD45 589 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 NLRC4Q9NPP4 1024 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 HOMER2Q9NSB8 354 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 FKBP14Q9NWM8 211 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 BABAM2Q9NXR7 383 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 TUBGCP4Q9UGJ1 667 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms