RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 HM13Q8TCT9 377 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 MAGEE2Q8TD90 523 aaPredicted RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF721Q8TF20 911 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 PIH1D2Q8WWB5 315 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 NRG4Q8WWG1 115 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC13A3Q8WWT9 602 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 HGDQ93099 445 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 RGMAQ96B86 450 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SDSLQ96GA7 329 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 RBM18Q96H35 190 aaKnown RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 PDLIM5Q96HC4 596 aaKnown RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC35E1Q96K37 410 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF583Q96ND8 569 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 VPS35Q96QK1 796 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 NR1H4Q96RI1 486 aaPredicted RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 ARHGDIGQ99819 225 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 KLHDC3Q9BQ90 382 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 CBWD1Q9BRT8 395 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 NIPSNAP3BQ9BS92 247 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 LMF2Q9BU23 707 aaKnown RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 KRTAP4-3Q9BYR4 195 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 FAM129AQ9BZQ8 928 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 IMUPQ9GZP8 106 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 KLC2Q9H0B6 622 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 TOLLIPQ9H0E2 274 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 OR52A5Q9H2C5 316 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 LRMDAQ9H2I8 198 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 LRRC19Q9H756 370 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 CXorf36Q9H7Y0 433 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 NOL11Q9H8H0 719 aaKnown RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 CYP3A43Q9HB55 503 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC25A19Q9HC21 320 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 MRPS30Q9NP92 439 aaKnown RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 TRIM36Q9NQ86 728 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 AGPAT3Q9NRZ7 376 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 VSX1Q9NZR4 365 aaPredicted RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 MED11Q9P086 117 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SENP1Q9P0U3 644 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 PEMTQ9UBM1 199 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 KLK11Q9UBX7 282 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC7A8Q9UHI5 535 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF230Q9UIE0 474 aaPredicted RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 FBXO2Q9UK22 296 aaPredicted RBP0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 AMFRQ9UKV5 643 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 RPH3ALQ9UNE2 315 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 SLC12A4Q9UP95 1085 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 HILPDAQ9Y5L2 63 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 PSAT1Q9Y617 370 aa0.54□□□□□ -2.32
RNU6-42P-201ENST00000384165 DSCAML1Q8TD84 2053 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGLV3-9A0A075B6K5 115 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGHV3-15A0A0B4J1V0 119 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 TEX48A0A1B0GUV7 120 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 A0A1B0GVL5 298 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 A0A1W2PPE2 198 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 A0A1W2PPV9 198 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 A0A1W2PQ09 198 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 FAM90A8PA6NJQ4 464 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 E5RJQ4 531 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 M0R1W7 72 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 PDLIM1O00151 329 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 HDAC3O15379 428 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 GALR3O60755 368 aaPredicted RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CTNSO60931 367 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 MFAP3LO75121 409 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 PPM1BO75688 479 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 HTR3BO95264 441 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 ETHE1O95571 254 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 C6orf47O95873 294 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CYB5R3P00387 301 aaPredicted RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGKV1D-12P01611 117 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGLV3-25P01717 112 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 IGHV3-13P01766 116 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 SERPINE1P05121 402 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CRYGDP07320 174 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CD55P08174 381 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 PDHA1P08559 390 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 FAM106CPP0CH98 169 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 NR2F6P10588 404 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF35P13682 527 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 ETFAP13804 333 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 ZNF44P15621 663 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CDK11BP21127 795 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CNTFP26441 200 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 PSMB8P28062 276 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CXCR5P32302 372 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 RPA3P35244 121 aaPredicted RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 HMGCLP35914 325 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 PSMC2P35998 433 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CCT6AP40227 531 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 P2RY1P47900 373 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 CLK3P49761 638 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 RAB9AP51151 201 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 WDR4P57081 412 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 SYNJ2BPP57105 145 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 RPS27AP62979 156 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 PRR3P79522 188 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 ARF1P84077 181 aaKnown RBP0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 IL18R1Q13478 541 aa0.53□□□□□ -2.32
RNU6-42P-201ENST00000384165 TSTA3Q13630 321 aaPredicted RBP0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms