RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OR6N2Q8NGY6 317 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 SCARF2Q96GP6 870 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 AMELYQ99218 206 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 VPS13AQ96RL7 3174 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 TRAV14DV4A0A0A6YYC5 116 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 TGFBR3LH3BV60 316 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 DNASE2O00115 360 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 AKR7A3O95154 331 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 ITGA5P08648 1049 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 CSF1P09603 554 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 AKAIN1P0CW23 69 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 POU3F4P49335 361 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 DEFA5Q01523 94 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 GRM7Q14831 915 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 DEFB110Q30KQ9 67 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM74A3Q4VXF1 159 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 TMED4Q7Z7H5 227 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 EXD3Q8N9H8 876 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 OR6K3Q8NGY3 331 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 C15orf40Q8WUR7 153 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 RLN3Q8WXF3 142 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 ATOH1Q92858 354 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 WDR13Q9H1Z4 485 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 LAMP5Q9UJQ1 280 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 FOXS1O43638 330 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 SNAPC5O75971 98 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC35E2P0CK97 266 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 GLULP15104 373 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF141Q15928 474 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 C2orf76Q3KRA6 126 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM122BQ7Z309 247 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF761Q86XN6 746 aaPredicted RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 CSNK1A1LQ8N752 337 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 OR10K1Q8NGX5 313 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 HOXB13Q92826 284 aaPredicted RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC25A28Q96A46 364 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM131CQ96AQ9 280 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 VSTM2LQ96N03 204 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 LMF1Q96S06 567 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 LMF2Q9BU23 707 aaKnown RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 TRBV5-7A0A0A0MS05 114 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 NPIPB9F8W1W9 429 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 OIP5O43482 229 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 PRSS3P35030 304 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 GRK6P43250 576 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 DMWDQ09019 674 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 LY6G6FQ5SQ64 297 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ELP2Q6IA86 826 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF546Q86UE3 836 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 CDC20BQ86Y33 519 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF595Q8IYB9 648 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF524Q96C55 264 aa12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 ELF4Q99607 663 aaPredicted RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
CLCNKA-202ENST00000375692 SERINC4A6NH21 518 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 M0QYG6 137 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 AQP8O94778 261 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 CD14P08571 375 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 RPA2P15927 270 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 CSF2RBP32927 897 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 CCR4P51679 360 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 PRPS1P60891 318 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 ALG10Q5BKT4 473 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 KRT77Q7Z794 578 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 GPR148Q8TDV2 347 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 ST8SIA2Q92186 375 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 LRRC46Q96FV0 321 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 KLHDC3Q9BQ90 382 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 ATG5Q9H1Y0 275 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 TAS2R8Q9NYW2 309 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 MYEF2Q9P2K5 600 aaKnown RBP12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 FBXO4Q9UKT5 387 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.36
CLCNKA-202ENST00000375692 ELOA3DA6NLF2 546 aaPredicted RBP12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 GMFGO60234 142 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM127O75204 238 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 CCKBRP32239 447 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 KIR3DL2P43630 455 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 ELOA3BQ3SY89 546 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 ARHGAP40Q5TG30 622 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM205Q6UW68 189 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 CLEC1AQ8NC01 280 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 ELOA3Q8NG57 546 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 ZNF417Q8TAU3 575 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 TMEM185BQ9H7F4 350 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 ZMAT3Q9HA38 289 aaKnown RBP12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 OR10H1Q9Y4A9 318 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 SPEGQ15772 3267 aa12.77□□□□□ -0.37
CLCNKA-202ENST00000375692 RFPL4AA6NLU0 287 aa12.76□□□□□ -0.37
CLCNKA-202ENST00000375692 EFCAB7A8K855 629 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms