RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 USP22Q9UPT9 525 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 LOXL2Q9Y4K0 774 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 TSPAN11A1L157 253 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 G3V3Y1 287 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 FABP7O15540 132 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 RAD1O60671 282 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 MT-ATP6P00846 226 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 FUCA1P04066 466 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 MTNR1BP49286 362 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 CHRNEQ04844 493 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 NKAIN1Q4KMZ8 207 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 Q6ZPB1 254 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR8J2Q8NGG1 315 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR4D10Q8NGI6 311 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 ISL2Q96A47 359 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 LYRM4Q9HD34 91 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 WIF1Q9Y5W5 379 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 TRBV4-1A0A0J9YWV2 114 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 PLSCR5A0PG75 271 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 POM121CA8CG34 1229 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 ALX3O95076 343 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 CTSLP07711 333 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 LIM2P55344 173 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 MLF1P58340 268 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 ENTHD1Q8IYW4 607 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 MZB1Q8WU39 189 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 UCN3Q969E3 161 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 SERINC4A6NH21 518 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF587BE7ETH6 402 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 FURINP09958 794 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 MED25Q71SY5 747 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM200AQ86VY9 491 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 ADGRF3Q8IZF5 1079 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZFAND1Q8TCF1 268 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC25A31Q9H0C2 315 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SPACA1Q9HBV2 294 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 TRAV27A0A087WT01 109 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 PRKRAO75569 313 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 MED6O75586 246 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 CR2P20023 1033 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 PSMB1P20618 241 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC6A12P48065 614 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 ALKAL2Q6UX46 152 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 PELI3Q8N2H9 469 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 MYEOVQ96EZ4 313 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 ULBP2Q9BZM5 246 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 DVL2O14641 736 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 NSA2O95478 260 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 DPP4P27487 766 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 HLA-DMAP28067 261 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 POU3F1Q03052 451 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC48A1Q6P1K1 146 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 NLRC3Q7RTR2 1065 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SULF2Q8IWU5 870 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SUMF1Q8NBK3 374 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 DYNLRB1Q9NP97 96 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 GLB1P16278 677 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 GABRG2P18507 467 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 EPHA1P21709 976 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 CLPPQ16740 277 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC2A12Q8TD20 617 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 PATE1Q8WXA2 126 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 OSGIN1Q9UJX0 560 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 DIMT1Q9UNQ2 313 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 RHBDD3Q9Y3P4 386 aa12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 GOLGA4Q13439 2230 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-201ENST00000372189 CCR9P51686 369 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC35A1P78382 337 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 LILRA6Q6PI73 481 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 C5orf46Q6UWT4 87 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 BPIFB2Q8N4F0 458 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 CNTNAP3Q9BZ76 1288 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 NKX6-2Q9C056 277 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 C11orf54Q9H0W9 315 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 EGLN3Q9H6Z9 239 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 PARD6AQ9NPB6 346 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 GAR1Q9NY12 217 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 ARGFXA6NJG6 315 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM183AA6NL82 134 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 TNFSF15O95150 251 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 MEOX2P50222 304 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR2T11Q8NH01 316 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 ASB17Q8WXJ9 295 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 FGGYQ96C11 551 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 SORCS2Q96PQ0 1159 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 AKIRIN1Q9H9L7 192 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 SEMA4GQ9NTN9 838 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 DNPH1O43598 174 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 TRAPPC2P0DI81 140 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 TRAPPC2BP0DI82 140 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 GDNFP39905 211 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 CX3CR1P49238 355 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms