RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 DAZLQ92904 295 aaKnown RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 CHIAQ9BZP6 476 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 CHRDQ9H2X0 955 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 TXNIPQ9H3M7 391 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 KCNG2Q9UJ96 466 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 TMA7Q9Y2S6 64 aaKnown RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 IGLV1-36A0A0B4J1U3 117 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 TCRBV16S1A1N1A0A5B0 115 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 OR6C76A6NM76 312 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 L7N2F9 121 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 NPIPB7O75200 414 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 TOXO94900 526 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 TMIGD3P0DMS9 266 aaPredicted RBP12.9□□□□□ -0.34
CD48-201ENST00000368045 RRASP10301 218 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 FSTP19883 344 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
CD48-201ENST00000368045 MPPED2Q15777 294 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 FAM166AQ6J272 317 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 RFPL4BQ6ZWI9 263 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 KRT77Q7Z794 578 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 SMRP1Q8NCR6 262 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 OR4C16Q8NGL9 310 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 CEP76Q8TAP6 659 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 STK35Q8TDR2 534 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 TSLPQ969D9 159 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 PTDSS2Q9BVG9 487 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 NUDT9Q9BW91 350 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 TBL1XR1Q9BZK7 514 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 CA10Q9NS85 328 aa12.9□□□□□ -0.34
CD48-201ENST00000368045 HEATR5AQ86XA9 2040 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 A0A1W2PR77 199 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CIB4A0PJX0 185 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 A8MUA0 341 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 A8MVM7 634 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 B8ZZF3 427 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 H3BMH7 237 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PYCARD-AS1I3L0S3 204 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ZNF217O75362 1048 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 OR6A2O95222 327 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 HLA-DQA2P01906 255 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 MELTFP08582 738 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CD37P11049 281 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PTHLHP12272 177 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 SDHBP21912 280 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CD27P26842 260 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PRSS3P35030 304 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 POU3F4P49335 361 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PPM1FP49593 454 aaPredicted RBP12.89□□□□□ -0.35
CD48-201ENST00000368045 PNLIPRP2P54317 469 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PLCXD2Q0VAA5 305 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ACKR1Q16570 336 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 MEP1BQ16820 701 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 FAAP20Q6NZ36 180 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 OGFOD3Q6PK18 319 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 TTLL10Q6ZVT0 673 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 SYT13Q7L8C5 426 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 MARCH3Q86UD3 253 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 OR51D1Q8NGF3 324 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 LRRC20Q8TCA0 184 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 AMELYQ99218 206 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ELF4Q99607 663 aaPredicted RBP12.89□□□□□ -0.35
CD48-201ENST00000368045 KLHDC3Q9BQ90 382 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 GINS4Q9BRT9 223 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CKLFQ9UBR5 152 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 SLCO1B1Q9Y6L6 691 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 TMED7-TICAM2A0A0A6YYA0 188 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 A0A1W2PPL8 197 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 H0YC42 278 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CFDP00746 253 aaPredicted RBP12.89□□□□□ -0.35
CD48-201ENST00000368045 CD2P06729 351 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 VSIG10L2P0DP72 767 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CRABP1P29762 137 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 CCKBRP32239 447 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 LTBRP36941 435 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 MAP2K6P52564 334 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 RIDAP52758 137 aaKnown RBP12.89□□□□□ -0.35
CD48-201ENST00000368045 LBX1P52954 281 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ACTBP60709 375 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ACTG1P63261 375 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PLA2G7Q13093 441 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 NKAIN2Q5VXU1 208 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 GLT8D1Q68CQ7 371 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 C3P1Q6ZMU1 363 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 LRRC69Q6ZNQ3 347 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 C9orf40Q8IXQ3 194 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PRR22Q8IZ63 422 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 FAM160A2Q8N612 972 aaPredicted RBP12.89□□□□□ -0.35
CD48-201ENST00000368045 OR8K3Q8NH51 312 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 C8orf44Q96CB5 159 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ELMOD3Q96FG2 381 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 RTN4RQ9BZR6 473 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms