RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 KCNRGQ8N5I3 272 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 OR6K3Q8NGY3 331 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SMIM14Q96QK8 99 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SLC35D1Q9NTN3 355 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SPHK1Q9NYA1 384 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 DUSP13Q9UII6 198 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 ARL2-SNX15V9GYD0 113 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SYT5O00445 386 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 PNPP00491 289 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 PTBP1P26599 531 aaKnown RBP eCLIP13.72□□□□□ -0.21
LMX1B-201ENST00000355497 RAB13P51153 203 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 EDDM3AQ14507 147 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 PIGMQ9H3S5 423 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF816-ZNF321PA0A0X1KG74 233 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 GLCEO94923 617 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 DUSP1P28562 367 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 RGRP47804 291 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 BTNL8Q6UX41 500 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 MOB1BQ7L9L4 216 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF321PQ8N8H1 164 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 FGF13Q92913 245 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 SLC2A8Q9NY64 477 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 CBY3A6NI87 242 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 CSF3P09919 207 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 C9orf152Q5JTZ5 239 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF583Q96ND8 569 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 CXorf36Q9H7Y0 433 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 V9GYS6 101 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 DDOSTP39656 456 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 DUSP6Q16828 381 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 TRIM61Q5EBN2 209 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 GTF2H5Q6ZYL4 71 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 NEURL3Q96EH8 262 aa13.71□□□□□ -0.21
LMX1B-201ENST00000355497 ADH4P08319 380 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 KIR2DL3P43628 341 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 P2RX3P56373 397 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 TAZQ16635 292 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 MANEAQ5SRI9 462 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 FAM185AQ8N0U4 392 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.22
LMX1B-201ENST00000355497 OR51A2Q8NGJ7 313 aa13.71□□□□□ -0.22
LMX1B-201ENST00000355497 NUDT19A8MXV4 375 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 G3V3Y1 287 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 CLEC2LP0C7M8 214 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 MRPS21P82921 87 aaKnown RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TM4SF18Q96CE8 201 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 AMBRA1Q9C0C7 1298 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 GRPP07492 148 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 GLB1P16278 677 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 KIAA1024LP59773 190 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 GJC3Q8NFK1 279 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 RLN3Q8WXF3 142 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 RASD2Q96D21 266 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 MS4A8Q9BY19 250 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 CBY1Q9Y3M2 126 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 MMACHCQ9Y4U1 282 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 PPP5D1E7EU14 171 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 OR2C1O95371 312 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 SRP9P49458 86 aaKnown RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 EMP3P54852 163 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 Q1RN00 199 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 LYSMD2Q8IV50 215 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 OR2L13Q8N349 312 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TMEM104Q8NE00 496 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 MN1Q10571 1320 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 H2AFB1P0C5Y9 115 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TACR1P25103 407 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TAGLNQ01995 201 aaKnown RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 ZNF239Q16600 458 aaKnown RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 COX20Q5RI15 118 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 BCDIN3DQ7Z5W3 292 aaKnown RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 ANGPTL5Q86XS5 388 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 OR13C8Q8NGS7 320 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 LKAAEAR1Q8TD35 194 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 CORO2AQ92828 525 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 SLC35A4Q96G79 324 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 H3BQ06 376 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 ICMTO60725 284 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 HEXAP06865 529 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 SLC35E2P0CK97 266 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 CT45A10P0DMU9 189 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 SELEP16581 610 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TRIM23P36406 574 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 BTG1P62324 171 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 SLCO4C1Q6ZQN7 724 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 FAM71CQ8NEG0 241 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 BPIFCQ8NFQ6 507 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 OR51S1Q8NGJ8 323 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-201ENST00000355497 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 NIPSNAP1Q9BPW8 284 aa13.7□□□□□ -0.22
LMX1B-201ENST00000355497 TUBB1Q9H4B7 451 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms