RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 F5P12259 2224 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 CASP6P55212 293 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 AGAP7PQ5VUJ5 663 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 RRNAD1Q96FB5 475 aaKnown RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 SLC25A19Q9HC21 320 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 A0A1W2PS29 197 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 LMO7DNF2Z398 122 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 UBL3O95164 117 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 RBM39Q14498 530 aaKnown RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 TSC22D1Q15714 1073 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 PCNPQ8WW12 178 aaKnown RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 RAB3CQ96E17 227 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 TSNAXQ99598 290 aaKnown RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 ARRDC1-AS1Q9H2J1 176 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 GPATCH2Q9NW75 528 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 ARRDC5A6NEK1 342 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 ADAM23O75077 832 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 PMP2P02689 132 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 CDK2P24941 298 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 ADH6P28332 368 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 SORDQ00796 357 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 HACD4Q5VWC8 232 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 SULF2Q8IWU5 870 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 CPT1CQ8TCG5 803 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 CMSS1Q9BQ75 279 aaKnown RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 METTL9Q9H1A3 318 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 CHST11Q9NPF2 352 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 B4DXG7 233 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 EFNA3P52797 238 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 HAGHLQ6PII5 290 aaPredicted RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 C10orf111Q8N326 155 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 OR9K2Q8NGE7 335 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 WWTR1Q9GZV5 400 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 OR7C1O76099 320 aaPredicted RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 EML2O95834 649 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 Q6ZNX1 250 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 GTPBP8Q8N3Z3 284 aaPredicted RBP11.87□□□□□ -0.51
VSTM4-202ENST00000332853 OR6F1Q8NGZ6 308 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 ARHGDIGQ99819 225 aa11.87□□□□□ -0.51
VSTM4-202ENST00000332853 POM121CA8CG34 1229 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TRAPPC2LH3BP13 241 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TCRBP04435 133 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 RFC3P40938 356 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 CX3CR1P49238 355 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 ARL6IP1Q15041 203 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 HLA-BQ31612 363 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 MORN4Q8NDC4 146 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 OR4Q3Q8NH05 313 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 SEC22AQ96IW7 307 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 PEX14O75381 377 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 BLVRBP30043 206 aaPredicted RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TAS2R31P59538 309 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TFF2Q03403 129 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 OR2M2Q96R28 347 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 NUDT9Q9BW91 350 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 OR6C76A6NM76 312 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 UBCP0CG48 685 aaKnown RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF813Q6ZN06 617 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 LANCL3Q6ZV70 420 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 OR2A5Q96R48 311 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TSPAN10Q9H1Z9 355 aaPredicted RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 DNAJB11Q9UBS4 358 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 PIGLQ9Y2B2 252 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TMEM82A0PJX8 343 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 C1QCP02747 245 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 QDPRP09417 244 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 HOXB9P17482 250 aaPredicted RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 CAMLGP49069 296 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 HNRNPFP52597 415 aaKnown RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TGFBR3Q03167 851 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 RBMS2Q15434 407 aaKnown RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 GUSBP11Q6P575 273 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 TMEM71Q6P5X7 295 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 SLC35B4Q969S0 331 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 WDR34Q96EX3 536 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 BANF2Q9H503 90 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 C20orf141Q9NUB4 165 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 KCNG2Q9UJ96 466 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 RNF4P78317 190 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF684Q5T5D7 378 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 USP51Q70EK9 711 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 MKXQ8IYA7 352 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 OR56B4Q8NH76 319 aa11.86□□□□□ -0.51
VSTM4-202ENST00000332853 ZC3H10Q96K80 434 aaKnown RBP11.86□□□□□ -0.51
VSTM4-202ENST00000332853 FRG2CA6NGY1 282 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 BET1O15155 118 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 ATP1B1P05026 303 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 FOLR1P15328 257 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 PSMB1P20618 241 aaKnown RBP11.85□□□□□ -0.51
VSTM4-202ENST00000332853 PMPCAQ10713 525 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 Q6ZTK2 550 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 OR2L13Q8N349 312 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 SLC43A2Q8N370 569 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 GLYATL2Q8WU03 294 aa11.85□□□□□ -0.51
VSTM4-202ENST00000332853 LOC100289279A0A1B0GTE1 492 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms