RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 WFDC6Q9BQY6 131 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 CWH43Q9H720 699 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 APMAPQ9HDC9 416 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 MARCH5Q9NX47 278 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ZDHHC3Q9NYG2 299 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 SCN5AQ14524 2016 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 PLXNB3Q9ULL4 1909 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 OR1F1O43749 312 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF821O75541 412 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TBX6O95947 436 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 CHRM4P08173 479 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 AQP2P41181 271 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 MC3RP41968 323 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 DVL1P1P54792 670 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 PTSQ03393 145 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 CDKN3Q16667 212 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 DUSP5Q16690 384 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 RNF151Q2KHN1 245 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ACSM3Q53FZ2 586 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 VWA2Q5GFL6 755 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TCTN3Q6NUS6 607 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 FAM199XQ6PEV8 388 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 DRAM2Q6UX65 266 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 PXKQ7Z7A4 578 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 MRGPREQ86SM8 312 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 CRIPAKQ8N1N5 446 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF283Q8N7M2 679 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 SLC25A43Q8WUT9 341 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 JSRP1Q96MG2 331 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 FAAP24Q9BTP7 215 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ADAM19Q9H013 955 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 LPAR2Q9HBW0 351 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 KCNE5Q9UJ90 142 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 SLCO1B1Q9Y6L6 691 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TCRBV21S2A2A0A5A6 115 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SLC11A1P49279 550 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RPS15P62841 145 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RPS24P62847 133 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RASGEF1BQ0VAM2 473 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 UBE2V2Q15819 145 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RPS26P11Q5JNZ5 115 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 HENMT1Q5T8I9 393 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 OR2T2Q6IF00 324 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 PODNL1Q6PEZ8 512 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RPTNQ6XPR3 784 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 FRRS1Q6ZNA5 592 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 OR51G2Q8NGK0 314 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 OR5M8Q8NGP6 311 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 DEFB118Q96PH6 123 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 ALKBH3Q96Q83 286 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 TIMP4Q99727 224 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RSPO3Q9BXY4 272 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 CRISPLD2Q9H0B8 497 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SLC25A31Q9H0C2 315 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SRMSQ9H3Y6 488 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 POFUT1Q9H488 388 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 EXO5Q9H790 373 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 A4GALTQ9NPC4 353 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 IGLV3-16A0A075B6K0 115 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 M0QZK8 103 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 MAN2B1O00754 1011 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 XRCC3O43542 346 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 CDC14BO60729 498 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 PQBP1O60828 265 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SMPD2O60906 423 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 ETHE1O95571 254 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SELEP16581 610 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 HTR2CP28335 458 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 AFF3P51826 1226 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 PLEKHS1Q5SXH7 462 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 STPG1Q5TH74 334 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 ULK3Q6PHR2 472 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 TPGS1Q6ZTW0 290 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 UBE3DQ7Z6J8 389 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 TMED4Q7Z7H5 227 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SLC24A4Q8NFF2 622 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 OR4K1Q8NGD4 311 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 M1APQ8TC57 530 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 OIT3Q8WWZ8 545 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 CLP1Q92989 425 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 SMIM8Q96KF7 97 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 NKX3-1Q99801 234 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 URM1Q9BTM9 101 aaKnown RBP10.79□□□□□ -0.68
SHMT2-201ENST00000328923 RNF208Q9H0X6 261 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 DNAJC4Q9NNZ3 241 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 CYTL1Q9NRR1 136 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 COLEC10Q9Y6Z7 277 aa10.79□□□□□ -0.68
SHMT2-201ENST00000328923 FLRT2O43155 660 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 CTNSO60931 367 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 PLGP00747 810 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 FURINP09958 794 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 CCR4P51679 360 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 RHOAP61586 193 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 BDH1Q02338 343 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ENPP2Q13822 863 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 DDX39BQ13838 428 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms