RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 FAM3CQ92520 227 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 INTS12Q96CB8 462 aaKnown RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TEAD3Q99594 435 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TMEM184BQ9Y519 407 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 A0A0A6YYJ9 748 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TGOLN2O43493 480 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 XRCC3O43542 346 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 NME2P1O60361 137 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 PDGFBP01127 241 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 MAP2K6P52564 334 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 YOD1Q5VVQ6 348 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 FAM26EQ8N5C1 309 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CGGBP1Q9UFW8 167 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TMEM235A6NFC5 223 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 HCRTR1O43613 425 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 SULT1C4O75897 302 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CPEP16870 476 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 ARG2P78540 354 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 RNF212Q495C1 297 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 DBX2Q6ZNG2 339 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 NAXDQ8IW45 347 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CNEP1R1Q8N9A8 125 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 ZNF680Q8NEM1 530 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 RASD2Q96D21 266 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CLSTN3Q9BQT9 956 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 DUSP21Q9H596 190 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 PLEKHF2Q9H8W4 249 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 NXT1Q9UKK6 140 aaKnown RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 MN1Q10571 1320 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 MTHFD2P13995 350 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 P2RX3P56373 397 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 EXOSC2Q13868 293 aaKnown RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 FAM71E1Q6IPT2 247 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 REEP6Q96HR9 211 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 C12orf57Q99622 126 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 ZNF768Q9H5H4 540 aaKnown RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 SH3BGRL2Q9UJC5 107 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CBY1Q9Y3M2 126 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 SLC5A10A0PJK1 596 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 B4GALT3O60512 393 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CD63P08962 238 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 HLA-FP30511 346 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 GZMKP49863 264 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 TEKQ02763 1124 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 XKR7Q5GH72 579 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 FAM234AQ9H0X4 552 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 AK3Q9UIJ7 227 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 BOKQ9UMX3 212 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 NSG1A0A0A6YYJ2 146 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 NXPH3O95157 252 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 DUSP1P28562 367 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 OR2B8PP59922 312 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 UBE2IP63279 158 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 OR8G2PQ6IF36 304 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 MFSD12Q6NUT3 480 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 CMTM2Q8TAZ6 248 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 PIGTQ969N2 578 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 ZNF775Q96BV0 537 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 PRR14Q9BWN1 585 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 GAREM1Q9H706 876 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 DCTN6O00399 190 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 TAPBPO15533 448 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 UTS2O95399 124 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 OR10J4P0C629 311 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 RAB1AP62820 205 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 MAT1AQ00266 395 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 MED25Q71SY5 747 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 UBE2G2P60604 165 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 EEF1A2Q05639 463 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 SUCNR1Q9BXA5 334 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 ACER3Q9NUN7 267 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 C17orf67Q0P5P2 114 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 ARHGAP11BQ3KRB8 267 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 OR1M1Q8NGA1 313 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 OR1J2Q8NGS2 313 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 GNPNAT1Q96EK6 184 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 LCORQ96JN0 433 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 GABARAPL1Q9H0R8 117 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
CLCN6-201ENST00000312413 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
CLCN6-201ENST00000312413 ABHD16AO95870 558 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 PSMB6P28072 239 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 FOXB2Q5VYV0 432 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms