RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SPINK14Q6IE38 97 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 LYPD4Q6UWN0 246 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 TMPPEQ6ZT21 453 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 RFLNBQ8N5W9 214 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 TRMT61AQ96FX7 289 aaKnown RBP13.93□□□□□ -0.18
LSM6-201ENST00000296581 PIGQQ9BRB3 760 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 UQCC2Q9BRT2 126 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 NUAK2Q9H093 628 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 PAQR5Q9NXK6 330 aaPredicted RBP13.93□□□□□ -0.18
LSM6-201ENST00000296581 ATPIF1Q9UII2 106 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 ALPK2Q86TB3 2170 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 GVINP1Q7Z2Y8 2422 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SLC22A23A1A5C7 686 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 NPIPA5E9PKD4 350 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 PMS2P2O95744 297 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 IFNGR1P15260 489 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 HTR2BP41595 481 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 HCCSP53701 268 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 RPS25P62851 125 aaKnown RBP13.92□□□□□ -0.18
LSM6-201ENST00000296581 HSF2Q03933 536 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 FOXO1Q12778 655 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 ZNF181Q2M3W8 571 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 YIF1BQ5BJH7 314 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 ZNF544Q6NX49 715 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 CD200R1LQ6Q8B3 271 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SLC35D2Q76EJ3 337 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 TIGD4Q8IY51 512 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SYS1Q8N2H4 156 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 LINC00469Q8N7U9 141 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 ZFP41Q8N8Y5 198 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 ZNF511Q8NB15 262 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 IL17RDQ8NFM7 739 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 TRIM36Q9NQ86 728 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 NPIPA1Q9UND3 350 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SSR3Q9UNL2 185 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 COPS3Q9UNS2 423 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 B9D1Q9UPM9 204 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SEC14L5O43304 696 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 WDPCPO95876 746 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 F10P00742 488 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 GPR85P60893 370 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 ACTA2P62736 377 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 RAC1P63000 192 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 ACTG2P63267 376 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SLC35A1P78382 337 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 POU3F1Q03052 451 aaPredicted RBP13.92□□□□□ -0.18
LSM6-201ENST00000296581 RTP5Q14D33 572 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 VASNQ6EMK4 673 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 VASH2Q86V25 355 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 GALNT16Q8N428 558 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 THAP4Q8WY91 577 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 C4orf36Q96KX1 117 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SIGLEC12Q96PQ1 595 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 FAM173AQ9BQD7 235 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 SLIRPQ9GZT3 109 aaKnown RBP13.92□□□□□ -0.18
LSM6-201ENST00000296581 ZFP64Q9NPA5 681 aa13.92□□□□□ -0.18
LSM6-201ENST00000296581 EXOSC4Q9NPD3 245 aaKnown RBP13.92□□□□□ -0.18
LSM6-201ENST00000296581 FREM3P0C091 2139 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 IGLV1-36A0A0B4J1U3 117 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 LOC102725191A0A1B0GVB3 256 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 PINLYPA6NC86 204 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 SULT2B1O00204 365 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 RFPL3SP0C7P2 107 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 CELP19835 753 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 CENPAP49450 140 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 RRADP55042 308 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 OR12D2P58182 307 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 RUNX1T1Q06455 604 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 DIABLOQ9NR28 239 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 NUP50Q9UKX7 468 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 BOKQ9UMX3 212 aaPredicted RBP13.91□□□□□ -0.18
LSM6-201ENST00000296581 FAM186AA6NE01 2351 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 MED12Q93074 2177 aa13.91□□□□□ -0.18
LSM6-201ENST00000296581 PNMA8CA0A1B0GUJ8 204 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 ARGFXA6NJG6 315 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 AQP7P3A6NL99 342 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 TBX1O43435 398 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 BLVRAP53004 296 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 TAS2R43P59537 309 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 OR1C1Q15619 314 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 Q5BKY6 102 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 CCBE1Q6UXH8 406 aaPredicted RBP13.9□□□□□ -0.18
LSM6-201ENST00000296581 LINC00696Q6ZRV3 163 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 CELF2-AS1Q8N7Q2 184 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 KCNK17Q96T54 332 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 MNTQ99583 582 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
LSM6-201ENST00000296581 CCDC59Q9P031 241 aaKnown RBP13.9□□□□□ -0.18
LSM6-201ENST00000296581 SIRT4Q9Y6E7 314 aaPredicted RBP13.9□□□□□ -0.18
LSM6-201ENST00000296581 TRDV1A0A1B0GX56 115 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 ZNF814B7Z6K7 855 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 E9PI62 339 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 ZNF670-ZNF695F2Z2N8 137 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 J3QLW9 94 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 LRRTM2O43300 516 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 ZNF19P17023 458 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 H3F3AP84243 136 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 CDC20BQ86Y33 519 aa13.9□□□□□ -0.18
LSM6-201ENST00000296581 WDFY1Q8IWB7 410 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms