RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 SIX6O95475 246 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 THY1P04216 161 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 IGHV4-34P06331 123 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 TAS2R20P59543 309 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 GPLD1P80108 840 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 RBMS2Q15434 407 aaKnown RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 ZNF141Q15928 474 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 LYSMD4Q5XG99 296 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 DMKNQ6E0U4 476 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 C16orf47Q6ZP98 133 aaPredicted RBP11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 GPR119Q8TDV5 335 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 CLEC1BQ9P126 229 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 COPS3Q9UNS2 423 aa11.23□□□□□ -0.61
TM9SF4-201ENST00000217315 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SPDEFO95238 335 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 MT-ATP6P00846 226 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 IGKV1D-16P01601 117 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CT45A8P0DMV1 189 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CT45A9P0DMV2 189 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CCNOP22674 350 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 DCTDP32321 178 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 ACAA2P42765 397 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 DEFA5Q01523 94 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CT45A2Q5DJT8 189 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 NPSR1Q6W5P4 371 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CREB3L2Q70SY1 520 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 COMMD7Q86VX2 200 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 C17orf50Q8WW18 174 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 C8orf44Q96CB5 159 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 URM1Q9BTM9 101 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 PPP1R3EQ9H7J1 279 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 MED29Q9NX70 200 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SLCO1C1Q9NYB5 712 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 VSX1Q9NZR4 365 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CTSFQ9UBX1 484 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 PTRH2Q9Y3E5 179 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 MTCL1Q9Y4B5 1905 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 G3V3Y1 287 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 IMPA2O14732 288 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SLC2A1P11166 492 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 TBXA2RP21731 343 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CD34P28906 385 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 C1QL3Q5VWW1 255 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 LANCL3Q6ZV70 420 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 COX15Q7KZN9 410 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 TAAR8Q969N4 342 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SDHCQ99643 169 aaPredicted RBP11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 CST11Q9H112 138 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 GVINP1Q7Z2Y8 2422 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 FOXS1O43638 330 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 HRGP04196 525 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SCRN3Q0VDG4 424 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SLC22A6Q4U2R8 563 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 BPIFB2Q8N4F0 458 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 RFLNBQ8N5W9 214 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 LSMEM1Q8N8F7 131 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 OR5M1Q8NGP8 315 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 ELP5Q8TE02 316 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 SMIM4Q8WVI0 70 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 RNF170Q96K19 258 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 MFFQ9GZY8 342 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 HRASLSQ9HDD0 168 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 EMC7Q9NPA0 242 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 ETV7Q9Y603 341 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 RNF215Q9Y6U7 377 aa11.22□□□□□ -0.61
TM9SF4-201ENST00000217315 FITM1A5D6W6 292 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 M0QYG6 137 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 LANCL1O43813 399 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 DCDP81605 110 aaKnown RBP11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 OR10K2Q6IF99 312 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 IDO2Q6ZQW0 420 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 MCEMP1Q8IX19 187 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 CCDC36Q8IYA8 594 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 TDHQ8IZJ6 230 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 EID2Q8N6I1 236 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 ZNF321PQ8N8H1 164 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 OR5D14Q8NGL3 314 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 HSD17B8Q92506 261 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 MVB12AQ96EY5 273 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 BCL2L14Q9BZR8 327 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 CHRNA9Q9UGM1 479 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 ZNF223Q9UK11 482 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 TEX13DA0A0J9YY54 714 aaPredicted RBP11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 PRSS37A4D1T9 235 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 FRG2CA6NGY1 282 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 TNFRSF10AO00220 468 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 S100A10P60903 97 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 RAP2BP61225 183 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 ZNF117Q03924 483 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 ACSM1Q08AH1 577 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 EMC4Q5J8M3 183 aa11.21□□□□□ -0.61
TM9SF4-201ENST00000217315 C3P1Q6ZMU1 363 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms