RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 C1QL3Q5VWW1 255 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 LCN10Q6JVE6 187 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 RPL22L1Q6P5R6 122 aaKnown RBP10.96□□□□□ -0.65
CHPF2-201ENST00000035307 PLCZ1Q86YW0 608 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 OR52I2Q8NH67 350 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 HYLS1Q96M11 299 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 KCNG2Q9UJ96 466 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 CYR61O00622 381 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 TP53I11O14683 189 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 PRH1P02810 166 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 TMEM225BP0DP42 221 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 SRMP19623 302 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 ANXA7P20073 488 aaKnown RBP10.96□□□□□ -0.65
CHPF2-201ENST00000035307 AVPR2P30518 371 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 EVI2BP34910 448 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 HTR3AP46098 478 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 ALKAL2Q6UX46 152 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 TMEM17Q86X19 198 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 ESX1Q8N693 406 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 BRIX1Q8TDN6 353 aaKnown RBP10.96□□□□□ -0.65
CHPF2-201ENST00000035307 SPG11Q96JI7 2443 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 MED17Q9NVC6 651 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 PLEK2Q9NYT0 353 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 MAB21L2Q9Y586 359 aa10.96□□□□□ -0.65
CHPF2-201ENST00000035307 A6NCN8 305 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 ZFAND5O76080 213 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 ZNF28P17035 718 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 HTR2AP28223 471 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 HMGA2P52926 109 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 FAM53BQ14153 422 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 TGIF1Q15583 401 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 INPP5JQ15735 1006 aaPredicted RBP10.96□□□□□ -0.66
CHPF2-201ENST00000035307 PRICKLE4Q2TBC4 344 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 B3GNTL1Q67FW5 361 aaPredicted RBP10.96□□□□□ -0.66
CHPF2-201ENST00000035307 MRM1Q6IN84 353 aaKnown RBP10.96□□□□□ -0.66
CHPF2-201ENST00000035307 OR5L2Q8NGL0 311 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 THAP6Q8TBB0 222 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 NT5CQ8TCD5 201 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 ADAMTS18Q8TE60 1221 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 C17orf50Q8WW18 174 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 POTEKPQ9BYX7 375 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 KLK11Q9UBX7 282 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 FBXL2Q9UKC9 423 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 PILRAQ9UKJ1 303 aa10.96□□□□□ -0.66
CHPF2-201ENST00000035307 OR14I1A6ND48 311 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 TRABD2BA6NFA1 517 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 RRAS2P62070 204 aaPredicted RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 ELAVL1Q15717 326 aaKnown RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 ABCA11PQ4W5N1 156 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 GLYATL3Q5SZD4 288 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 RAB12Q6IQ22 244 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 ZNF704Q6ZNC4 412 aaPredicted RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 KTI12Q96EK9 354 aaPredicted RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 NRIP3Q9NQ35 241 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 IL20Q9NYY1 176 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 PLA2G3Q9NZ20 509 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 NPFFR2Q9Y5X5 522 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 GBF1Q92538 1859 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 IGHV5-10-1A0A0J9YXX1 117 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 K7ESF4 209 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 WRBO00258 174 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 BRINP1O60477 761 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 OR7A10O76100 309 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 HOXC4P09017 264 aaPredicted RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 IFNGR1P15260 489 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 TSFMP43897 325 aaKnown RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 FXYD4P59646 89 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 EEF1A1P68104 462 aaKnown RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 TPBGQ13641 420 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 ACKR1Q16570 336 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 SWI5Q1ZZU3 235 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 ABHD17BQ5VST6 288 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 GARNL3Q5VVW2 1013 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 SLC22A10Q63ZE4 541 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 VASH2Q86V25 355 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 SLC38A9Q8NBW4 561 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 ZNF681Q96N22 645 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 MAN2C1Q9NTJ4 1040 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 HELZP42694 1942 aaKnown RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 STK17BO94768 372 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 AMY2BP19961 511 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 CCL11P51671 97 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 PRSS12P56730 875 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 CDK5Q00535 292 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 TOMM34Q15785 309 aaPredicted RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 YRDCQ86U90 279 aaKnown RBP10.95□□□□□ -0.66
CHPF2-201ENST00000035307 CCDC190Q86UF4 302 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 SIGLEC7Q9Y286 467 aa10.95□□□□□ -0.66
CHPF2-201ENST00000035307 FAM166BA8MTA8 275 aa10.94□□□□□ -0.66
CHPF2-201ENST00000035307 LCATP04180 440 aa10.94□□□□□ -0.66
CHPF2-201ENST00000035307 P04436 131 aa10.94□□□□□ -0.66
CHPF2-201ENST00000035307 THBS1P07996 1170 aa10.94□□□□□ -0.66
CHPF2-201ENST00000035307 ZNF16P17020 682 aaPredicted RBP10.94□□□□□ -0.66
CHPF2-201ENST00000035307 CFL1P23528 166 aaKnown RBP10.94□□□□□ -0.66
CHPF2-201ENST00000035307 MTNR1BP49286 362 aa10.94□□□□□ -0.66
CHPF2-201ENST00000035307 EVX1P49640 407 aa10.94□□□□□ -0.66
CHPF2-201ENST00000035307 PRTGQ2VWP7 1150 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms