RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SLC16A12Q6ZSM3 486 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 MS4A15Q8N5U1 240 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 LRRC17Q8N6Y2 441 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 OR51G2Q8NGK0 314 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 OR4K13Q8NH42 304 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 PHYHIPQ92561 330 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 THRSPQ92748 146 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 ADAD1Q96M93 576 aaKnown RBP15.41■□□□□ 0.06
PHGDH-234ENST00000642041 MOGAT1Q96PD6 335 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 UTP23Q9BRU9 249 aaKnown RBP15.41■□□□□ 0.06
PHGDH-234ENST00000642041 RHNO1Q9BSD3 238 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 NAA11Q9BSU3 229 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-234ENST00000642041 PTDSS2Q9BVG9 487 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 RNF32Q9H0A6 362 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 KCNN2Q9H2S1 579 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 MMP27Q9H306 513 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 GALNT9Q9HCQ5 603 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 IL20RAQ9UHF4 553 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 ABCA4P78363 2273 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 DOCK10Q96BY6 2186 aa15.41■□□□□ 0.06
PHGDH-234ENST00000642041 CCL21O00585 134 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 TMEM127O75204 238 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 ATE1O95260 518 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 LIMS3P0CW19 117 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 LIMS4P0CW20 117 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 DPP4P27487 766 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 GRPRP30550 384 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 GABRA5P31644 462 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 TGFBR2P37173 567 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 RAC1P63000 192 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 Q0VFX4 171 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 MOGQ16653 247 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 DESI1Q6ICB0 168 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 ZNF544Q6NX49 715 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 LEG1Q6P5S2 330 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 IGFL2Q6UWQ7 119 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 PAMR1Q6UXH9 720 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 C16orf47Q6ZP98 133 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-234ENST00000642041 WDSUB1Q8N9V3 476 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 SLC25A36Q96CQ1 311 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 ENKD1Q9H0I2 346 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 TAS2R5Q9NYW4 299 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 DKKL1Q9UK85 242 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 RASD1Q9Y272 281 aa15.4■□□□□ 0.06
PHGDH-234ENST00000642041 TRGV8A0A0C4DH27 118 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 TEX13CA0A0J9YWL9 993 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 LIPT2A6NK58 231 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 C12orf71A8MTZ7 269 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 C19orf84I3L1E1 186 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 CLPXO76031 633 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 SLC2A10O95528 541 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 SPI1P17947 270 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 AGAP20933 346 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 AHCYP23526 432 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 FGF9P31371 208 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ETV1P50549 477 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 GBX2P52951 348 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 FOXF1Q12946 379 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 TSTQ16762 297 aaKnown RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF324BQ6AW86 544 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF322Q6U7Q0 402 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 SHFQ7M4L6 423 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 PHC2Q8IXK0 858 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ASB17Q8WXJ9 295 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 SMPDL3BQ92485 455 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 DACH2Q96NX9 599 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 OPALINQ96PE5 141 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 SPOCK3Q9BQ16 436 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 FAM173AQ9BQD7 235 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ALG12Q9BV10 488 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ALG8Q9BVK2 526 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 QPCTLQ9NXS2 382 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 VSX1Q9NZR4 365 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 CCDC59Q9P031 241 aaKnown RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF346Q9UL40 294 aaKnown RBP15.39■□□□□ 0.05
PHGDH-234ENST00000642041 VDAC3Q9Y277 283 aa15.39■□□□□ 0.05
PHGDH-234ENST00000642041 CCDC182A6NF36 153 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 FAM183AA6NL82 134 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 NPIPA5E9PKD4 350 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF670-ZNF695F2Z2N8 137 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 TMCC2O75069 709 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 SULT1C4O75897 302 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 TDGF1P3P51864 188 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 EEF1A1P5Q5VTE0 462 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 RPUSD3Q6P087 351 aaKnown RBP15.38■□□□□ 0.05
PHGDH-234ENST00000642041 POMZP3Q6PJE2 187 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 PAQR6Q6TCH4 344 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 SLC16A9Q7RTY1 509 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 BCDIN3DQ7Z5W3 292 aaKnown RBP15.38■□□□□ 0.05
PHGDH-234ENST00000642041 ZBTB46Q86UZ6 589 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 SIRT6Q8N6T7 355 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 ZNF454Q8N9F8 522 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 SDR9C7Q8NEX9 313 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 INTS12Q96CB8 462 aaKnown RBP15.38■□□□□ 0.05
PHGDH-234ENST00000642041 Q96M85 177 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 OXGR1Q96P68 337 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 RBP7Q96R05 134 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 OR5M11Q96RB7 305 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 NMNAT3Q96T66 252 aa15.38■□□□□ 0.05
PHGDH-234ENST00000642041 MED18Q9BUE0 208 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms