RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 SLC39A5Q6ZMH5 540 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF595Q8IYB9 648 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 HSD17B11Q8NBQ5 300 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 RASD2Q96D21 266 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 MED30Q96HR3 178 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 PARP12Q9H0J9 701 aaKnown RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 EXOSC3Q9NQT5 275 aaKnown RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CBY3A6NI87 242 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF891A8MT65 544 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 H7C1Q1 480 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 UBE2G2P60604 165 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 FAM3DQ96BQ1 224 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 P2RY10O00398 339 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF93P35789 620 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 FLI1Q01543 452 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ETFRF1Q6IPR1 90 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 Q6ZTK2 550 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF296Q8WUU4 475 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 EGLN2Q96KS0 407 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ARV1Q9H2C2 271 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 EXO1Q9UQ84 846 aaKnown RBP8.43□□□□□ -1.06
CSMD1-218ENST00000635120 OR2C1O95371 312 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A6P0DMU7 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A5P0DMU8 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A7P0DMV0 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A8P0DMV1 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A9P0DMV2 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 HTR1FP30939 366 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF266Q14584 549 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A2Q5DJT8 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A1Q5HYN5 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 LMNTD1Q8N9Z9 388 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 CT45A3Q8NHU0 189 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 AMDHD1Q96NU7 426 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 TIMM29Q9BSF4 260 aa8.43□□□□□ -1.06
CSMD1-218ENST00000635120 BCORQ6W2J9 1755 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 MED13LQ71F56 2210 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 IGKV6-21A0A0C4DH24 114 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 OLFM2O95897 454 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 TRHRP34981 398 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 TMEM31Q5JXX7 168 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 CCDC71Q8IV32 467 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 SLC22A24Q8N4F4 322 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 RNF141Q8WVD5 230 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 PSORS1C1Q9UIG5 152 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ADAM10O14672 748 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 GCAP28676 217 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 S100A11P31949 105 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 PLAC9Q5JTB6 97 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 RETREG3Q86VR2 466 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 OR13F1Q8NGS4 319 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ERVMER34-1Q9H9K5 563 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ATXN1LP0C7T5 689 aaKnown RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 TMEM64Q6YI46 380 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 OVCH1Q7RTY7 1134 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 OR1J2Q8NGS2 313 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 SFT2D1Q8WV19 159 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 NMNAT3Q96T66 252 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 BOLA1Q9Y3E2 137 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 RREB1Q92766 1687 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 IGFBP1P08833 259 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 OR8U8P0C7N1 319 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 RPA2P15927 270 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 G0S2P27469 103 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 PIGAP37287 484 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 Q499Y3 187 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ZMAT1Q5H9K5 638 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 NKAIN2Q5VXU1 208 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 DBX2Q6ZNG2 339 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 RNF186Q9NXI6 227 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF816-ZNF321PA0A0X1KG74 233 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 H3BQ06 376 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 SHC1P29353 583 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 NHSL2Q5HYW2 709 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 GDF7Q7Z4P5 450 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF321PQ8N8H1 164 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 KIRREL1Q96J84 757 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 CLEC2DQ9UHP7 191 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 TRAF3IP2O43734 574 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 OR13C7P0DN81 318 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 NFYBP25208 207 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 HOXD9P28356 352 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ZNF133P52736 654 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 IAH1Q2TAA2 248 aaPredicted RBP8.42□□□□□ -1.06
CSMD1-218ENST00000635120 STEAP1BQ6NZ63 245 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 SNX11Q9Y5W9 270 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 C7orf72A4D263 438 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 F6UZH7 168 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ETV6P41212 452 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 MDGA2Q7Z553 956 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 FRMD1Q8N878 549 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 LIPHQ8WWY8 451 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ABHD6Q9BV23 337 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 DLEC1Q9Y238 1755 aa8.42□□□□□ -1.06
CSMD1-218ENST00000635120 ADAM23O75077 832 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms