RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 DNAJC27Q9NZQ0 273 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 SELENONQ9NZV5 590 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 ICAM5Q9UMF0 924 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 DIMT1Q9UNQ2 313 aaKnown RBP11.38□□□□□ -0.59
SCAF1-202ENST00000595242 LSM2Q9Y333 95 aaKnown RBP11.38□□□□□ -0.59
SCAF1-202ENST00000595242 MED31Q9Y3C7 131 aa11.38□□□□□ -0.59
SCAF1-202ENST00000595242 PCNX3Q9H6A9 2034 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 A0A1W2PQD3 144 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 SURF4O15260 269 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 CSTAP01040 98 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 PTHP01270 115 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 IGHV4-39P01824 125 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 HMGN1P05114 100 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 THBDP07204 575 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 IFI30P13284 250 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 MAKP20794 623 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 TBXA2RP21731 343 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 CASP3P42574 277 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 STARP49675 285 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 GAS1P54826 345 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 FXYD6P3P58550 94 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 SNAPC1Q16533 368 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 TIGD6Q17RP2 521 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 TMEM249Q2WGJ8 235 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 AADACL4Q5VUY2 407 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 OR2A2Q6IF42 318 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 ULK3Q6PHR2 472 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 P4HA3Q7Z4N8 544 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 OR2T33Q8NG76 320 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 OR1J4Q8NGS1 313 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 OR4C3Q8NH37 302 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 AKAP1Q92667 903 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCAF1-202ENST00000595242 PLPPR2Q96GM1 343 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 TMEM204Q9BSN7 226 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 TEX12Q9BXU0 123 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 OR52D1Q9H346 318 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 MEPEQ9NQ76 525 aaPredicted RBP11.37□□□□□ -0.59
SCAF1-202ENST00000595242 BAIAP2Q9UQB8 552 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 SIGLEC7Q9Y286 467 aa11.37□□□□□ -0.59
SCAF1-202ENST00000595242 BHLHE40O14503 412 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 TSPAN2O60636 221 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 PTP4A3O75365 173 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 BCL10O95999 233 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 CD36P16671 472 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 SRD5A1P18405 259 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 LIPAP38571 399 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 KIR2DL2P43627 348 aaPredicted RBP11.36□□□□□ -0.59
SCAF1-202ENST00000595242 RFX3P48380 749 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 RAB40BQ12829 278 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 SKP2Q13309 424 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 SPCS2Q15005 226 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 NNATQ16517 81 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 KLHL22Q53GT1 634 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.36□□□□□ -0.59
SCAF1-202ENST00000595242 CDK20Q8IZL9 346 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 LNX2Q8N448 690 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF610Q8N9Z0 462 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 PROKR2Q8NFJ6 384 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 OR14L1PQ8NHC6 308 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 PFN4Q8NHR9 129 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 FANK1Q8TC84 345 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 DNAJA4Q8WW22 397 aaPredicted RBP11.36□□□□□ -0.59
SCAF1-202ENST00000595242 BPIFA2Q96DR5 249 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 LRR1Q96L50 414 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 DCUN1D5Q9BTE7 237 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 TAPBPLQ9BX59 468 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 JAM3Q9BX67 310 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 SLC19A3Q9BZV2 496 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 C12orf10Q9HB07 376 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 HHATLQ9HCP6 504 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 C20orf141Q9NUB4 165 aa11.36□□□□□ -0.59
SCAF1-202ENST00000595242 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.36□□□□□ -0.59
SCAF1-202ENST00000595242 A0A087WUJ7 227 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 C2orf92A0A1B0GVN3 265 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 UTS2O95399 124 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 RAB36O95755 333 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 CGAP01215 116 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 SOD3P08294 240 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 UBL4AP11441 157 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
SCAF1-202ENST00000595242 CFPP27918 469 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 PNLIPRP2P54317 469 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 SIRPAP78324 504 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCAF1-202ENST00000595242 ALG10BQ5I7T1 473 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 LIPNQ5VXI9 398 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 NXNL2Q5VZ03 156 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 SLC30A6Q6NXT4 461 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 NUP54Q7Z3B4 507 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 MEX3DQ86XN8 651 aaKnown RBP11.35□□□□□ -0.59
SCAF1-202ENST00000595242 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 ARIH2OSQ8N7S6 290 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 OR52L1Q8NGH7 329 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 OR52I1Q8NGK6 324 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 TBC1D15Q8TC07 691 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 RFKQ969G6 155 aa11.35□□□□□ -0.59
SCAF1-202ENST00000595242 TP53INP1Q96A56 240 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms