RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 C9orf40Q8IXQ3 194 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 C3orf49Q96BT1 292 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ART5Q96L15 291 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 A0A087WUJ7 227 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 HMSDA8MTL9 139 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 FZD7O75084 574 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 IGHA1P01876 353 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 RAB13P51153 203 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 SNTB2Q13425 540 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 GK2Q14410 553 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 VASNQ6EMK4 673 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF704Q6ZNC4 412 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 KMT5CQ86Y97 462 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 OR5M9Q8NGP3 310 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 SMAP2Q8WU79 429 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 SPRYD4Q8WW59 207 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ADIPOR1Q96A54 375 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF649Q9BS31 505 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ESRP2Q9H6T0 727 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ISG20L2Q9H9L3 353 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 NANSQ9NR45 359 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ZDBF2Q9HCK1 2354 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 ASCC3Q8N3C0 2202 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 FRG2CA6NGY1 282 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 GSTZ1O43708 216 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 ICOSLGO75144 302 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 OR2A4O95047 310 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 HPP00738 406 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 IFNA4P05014 189 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC6A6P31641 620 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 NR0B1P51843 470 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 HLA-BQ31612 363 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 FAM69AQ5T7M9 428 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 HLA-DQA1Q5Y7H0 255 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 PMS2CLQ68D20 193 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 TMEM71Q6P5X7 295 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 BAIAP2L2Q6UXY1 529 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 RAB11FIP2Q7L804 512 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 TPRA1Q86W33 373 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 TMEM99Q8N816 258 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 DAZLQ92904 295 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 OR2A7Q96R45 310 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 GAREM1Q9H706 876 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 IGHV3-20A0A0C4DH32 117 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 C17orf51A8MQB3 221 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 SUSD5O60279 629 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 CFIP05156 583 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 S100A6P06703 90 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 CD3GP09693 182 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF3P17036 446 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 SKP2Q13309 424 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 KLF9Q13886 244 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 EBPQ15125 230 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 KLBQ86Z14 1044 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC38A9Q8NBW4 561 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 FAM98AQ8NCA5 519 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 OR10H4Q8NGA5 316 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 OR2I1PQ8NGU4 316 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 SAP25Q8TEE9 199 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 KISS1RQ969F8 398 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 TEAD3Q99594 435 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 KLHDC3Q9BQ90 382 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 MESP1Q9BRJ9 268 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 DUSP23Q9BVJ7 150 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 RTN4RQ9BZR6 473 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 COPS7AQ9UBW8 275 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 RASD1Q9Y272 281 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 ADAM18Q9Y3Q7 739 aa15.49■□□□□ 0.07
SHKBP1-205ENST00000594973 FER1L5A0AVI2 2057 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 A0A1W2PQM1 296 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 OR2M5A3KFT3 312 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 TRABD2BA6NFA1 517 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 POM121CA8CG34 1229 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 MCIDASD6RGH6 385 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 J3QRE1 110 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 AQP8O94778 261 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 IL12BP29460 328 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 RPL4P36578 427 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 CCL7P80098 99 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 INSL4Q14641 139 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 NR0B2Q15466 257 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 HFEQ30201 348 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SFRP5Q5T4F7 317 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 FNDC7Q5VTL7 733 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 TMUB2Q71RG4 321 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ACBD7Q8N6N7 88 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SDR9C7Q8NEX9 313 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 OR52E2Q8NGJ4 325 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 OR4K13Q8NH42 304 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 HAVCR2Q8TDQ0 301 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF524Q96C55 264 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 OR6C1Q96RD1 312 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 JAM3Q9BX67 310 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 MED11Q9P086 117 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 MGAT4CQ9UBM8 478 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 PILRBQ9UKJ0 227 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 LY6G6EA0A0G2JKS1 128 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 A0A1B0GTQ1 180 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ELOA3DA6NLF2 546 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms