RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 OR4F4Q96R69 305 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 CCT7Q99832 543 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 ULBP2Q9BZM5 246 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 OR51I1Q9H343 314 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 CENPHQ9H3R5 247 aa11.6□□□□□ -0.55
CSNK1D-213ENST00000580446 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 A8MVM7 634 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 FTCDNL1E5RQL4 147 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 E9PQ18 207 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 M0R082 166 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 MFN2O95140 757 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 CYB5R3P00387 301 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 MMP9P14780 707 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 PKNOX1P55347 436 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 BPIFB3P59826 476 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 EPS8Q12929 822 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 TNFAIP8L2Q6P589 184 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 TRIM46Q7Z4K8 759 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF420Q8TAQ5 688 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF417Q8TAU3 575 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 XAGE5Q8WWM1 108 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 LRTOMTQ8WZ04 291 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 OXGR1Q96P68 337 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 ZNF587Q96SQ5 575 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 TMEM246Q9BRR3 403 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 PTDSS2Q9BVG9 487 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 BCL2L14Q9BZR8 327 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 OR2J1Q9GZK6 312 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 RLIMQ9NVW2 624 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 GIMAP2Q9UG22 337 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 STK38LQ9Y2H1 464 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 GPR45Q9Y5Y3 372 aa11.59□□□□□ -0.55
CSNK1D-213ENST00000580446 CFAP73A6NFT4 308 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 TMEM178BH3BS89 294 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 P2RY10O00398 339 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 CRCPO75575 148 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 SERPINI2O75830 405 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 AHSA1O95433 338 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 C1QCP02747 245 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 TFPTP0C1Z6 253 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 GTF2E2P29084 291 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 WNT5AP41221 380 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 MMP16P51512 607 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 HOXA4Q00056 320 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 C2orf54Q08AI8 447 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 HABP2Q14520 560 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 TBC1D28Q2M2D7 210 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 RFTN2Q52LD8 501 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 COX20Q5RI15 118 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 C6orf120Q7Z4R8 191 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 CCNYL1Q8N7R7 359 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 C19orf18Q8NEA5 215 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 OR6N1Q8NGY5 312 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 SFXN5Q8TD22 340 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 KLF14Q8TD94 323 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 OR5P2Q8WZ92 322 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 ROPN1LQ96C74 230 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 SLC35G5Q96KT7 338 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 OR8B2Q96RD0 313 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 GSTO2Q9H4Y5 243 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 C1orf109Q9NX04 203 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 KIF17Q9P2E2 1029 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 CLN8Q9UBY8 286 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 FAM96BQ9Y3D0 163 aa11.58□□□□□ -0.56
CSNK1D-213ENST00000580446 BTBD17A6NE02 478 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 ZNF879B4DU55 563 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 CD55P08174 381 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 PRG2P13727 222 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 MAGEA12P43365 314 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 EMX1Q04741 257 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 COX10Q12887 443 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 NAB1Q13506 487 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 LY6EQ16553 131 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 ZNF718Q3SXZ3 478 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 GALNTL6Q49A17 601 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 RFPL4BQ6ZWI9 263 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 VASH1Q7L8A9 365 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 ZNF627Q7L945 461 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 SLC22A24Q8N4F4 322 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 WFDC9Q8NEX5 89 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 PLEKHA8Q96JA3 519 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 TCF7L2Q9NQB0 619 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 DNAJB11Q9UBS4 358 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 FBXL3Q9UKT7 428 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 FIS1Q9Y3D6 152 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 JRKLQ9Y4A0 524 aa11.57□□□□□ -0.56
CSNK1D-213ENST00000580446 RNF103-CHMP3A0A140T963 221 aa11.56□□□□□ -0.56
CSNK1D-213ENST00000580446 RNASEK-C17orf49H0YIS7 233 aa11.56□□□□□ -0.56
CSNK1D-213ENST00000580446 ENSAO43768 121 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-213ENST00000580446 NPIPB7O75200 414 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms