RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 TRMUO75648 421 aaKnown RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 YEATS4O95619 227 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 FGFR1OPO95684 399 aaKnown RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 IGLV3-19P01714 112 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 EDN1P05305 212 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 ANXA5P08758 320 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 ACAA1P09110 424 aaPredicted RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 BCKDHAP12694 445 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 DCKP27707 260 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 YWHABP31946 246 aaKnown RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 SLC1A2P43004 574 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 GNPDA1P46926 289 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 ARRB1P49407 418 aaPredicted RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 EMDP50402 254 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 KCNJ2P63252 427 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 COL10A1Q03692 680 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 RAB40BQ12829 278 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 EIF3IQ13347 325 aaKnown RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 KLF9Q13886 244 aaPredicted RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 CD226Q15762 336 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 VPS26BQ4G0F5 336 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 WDR38Q5JTN6 314 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 C6orf183Q5T699 404 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 LRRC31Q6UY01 552 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 NCCRP1Q6ZVX7 275 aaPredicted RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 ZFAND4Q86XD8 727 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 LACC1Q8IV20 430 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 OR5T3Q8NGG3 340 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 OR9G4Q8NGQ1 327 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 NDNFQ8TB73 568 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 MAPK15Q8TD08 544 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 PAQR8Q8TEZ7 354 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 AENQ8WTP8 325 aaKnown RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 SORCS1Q8WY21 1168 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 UBE2E3Q969T4 207 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 DNAJA3Q96EY1 480 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 CLCC1Q96S66 551 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 MAPKAP1Q9BPZ7 522 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 C19orf43Q9BQ61 176 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 MCRIP2Q9BUT9 160 aaKnown RBP4.81□□□□□ -1.64
VPS53-219ENST00000576019 PRRG3Q9BZD7 231 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 GLIPR2Q9H4G4 154 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 CHMP5Q9NZZ3 219 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 GALPQ9UBC7 116 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 RNF24Q9Y225 148 aa4.81□□□□□ -1.64
VPS53-219ENST00000576019 A0A1B0GUS0 222 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 A0A1W2PS18 150 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 SERPINE3A8MV23 424 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 C16orf97H3BN30 126 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 FCN1O00602 326 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 SIVA1O15304 175 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 INPP4BO15327 924 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 PSTPIP1O43586 416 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 KDELR3O43731 214 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 AP2A1O95782 977 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 DAOP14920 347 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 ZNF43P17038 809 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 GABRR2P28476 465 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 OXTRP30559 389 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 YWHAEP62258 255 aaKnown RBP4.8□□□□□ -1.64
VPS53-219ENST00000576019 GUCY2DQ02846 1103 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 SRSF4Q08170 494 aaKnown RBP4.8□□□□□ -1.64
VPS53-219ENST00000576019 CDC20Q12834 499 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 LAGE3Q14657 143 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 MTF1Q14872 753 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 FASTKD3Q14CZ7 662 aaKnown RBP4.8□□□□□ -1.64
VPS53-219ENST00000576019 ETFDHQ16134 617 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 ECSCRQ19T08 205 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 GTDC1Q4AE62 458 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 LY6G6FQ5SQ64 297 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 SEL1L2Q5TEA6 688 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 OR8G2PQ6IF36 304 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 ZNF425Q6IV72 752 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 TTC23LQ6PF05 361 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 CHMP1BQ7LBR1 199 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 MMAAQ8IVH4 418 aaKnown RBP4.8□□□□□ -1.64
VPS53-219ENST00000576019 CCDC65Q8IXS2 484 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 KIR3DL3Q8N743 410 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 WFDC11Q8NEX6 87 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 B3GNT7Q8NFL0 401 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 OR2T33Q8NG76 320 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 OR4F6Q8NGB9 312 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 OR13A1Q8NGR1 328 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 ITLN2Q8WWU7 325 aaPredicted RBP4.8□□□□□ -1.64
VPS53-219ENST00000576019 ZNF641Q96N77 438 aaPredicted RBP4.8□□□□□ -1.64
VPS53-219ENST00000576019 TNFRSF13CQ96RJ3 184 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 KCNS3Q9BQ31 491 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 NIPSNAP3BQ9BS92 247 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 GAL3ST2Q9H3Q3 398 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 TAAR2Q9P1P5 351 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 SEC14L4Q9UDX3 406 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 STAP1Q9ULZ2 295 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 ICAM5Q9UMF0 924 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 SCML2Q9UQR0 700 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 GMPPBQ9Y5P6 360 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 MYH6P13533 1939 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 RP1P56715 2156 aa4.8□□□□□ -1.64
VPS53-219ENST00000576019 IGKV6D-21A0A0A0MT36 114 aa4.79□□□□□ -1.64
VPS53-219ENST00000576019 SOCS2O14508 198 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms