RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CDH12P55289 794 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 NCALDP61601 193 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 FOXL1Q12952 345 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 RGNQ15493 299 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 OR1Q1Q15612 314 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 HFEQ30201 348 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 KRT71Q3SY84 523 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 THEM4Q5T1C6 240 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 REP15Q6BDI9 236 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 LRFN4Q6PJG9 635 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 C6orf89Q6UWU4 347 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 NHLRC1Q6VVB1 395 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 RBMS3Q6XE24 437 aaKnown RBP9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 C1QL4Q86Z23 238 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 CCDC36Q8IYA8 594 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF101Q8IZC7 436 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 SMYD1Q8NB12 490 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 SYT14Q8NB59 555 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 OR1J1Q8NGS3 322 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 IPCEF1Q8WWN9 437 aaPredicted RBP9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 LRRC58Q96CX6 371 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ZIM3Q96PE6 472 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 OR52B2Q96RD2 323 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF347Q96SE7 839 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 PAIP1Q9H074 479 aaKnown RBP9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ARMC7Q9H6L4 198 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 MSL2Q9HCI7 577 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 SLAMF8Q9P0V8 285 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 TRIM33Q9UPN9 1127 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 IFT52Q9Y366 437 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 CPSF4LA6NMK7 179 aaKnown RBP9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 TRAPPC2LH3BP13 241 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 CLIC1O00299 241 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 RNF13O43567 381 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF205O95201 554 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 CH25HO95992 272 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 OPN1SWP03999 348 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 QDPRP09417 244 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 SBK2P0C263 348 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF250P15622 560 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 FPR2P25090 351 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 WNT5AP41221 380 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 UCP2P55851 309 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 RGS8P57771 180 aaPredicted RBP9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 SELENOVP59797 346 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 OGFOD2Q6N063 350 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC35D2Q76EJ3 337 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC16A14Q7RTX9 510 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 MAVSQ7Z434 540 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 RBM45Q8IUH3 476 aaKnown RBP9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 GLB1L3Q8NCI6 653 aaPredicted RBP9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 DEFB108BQ8NET1 73 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 AKR7LQ8NHP1 331 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 VANGL1Q8TAA9 524 aaPredicted RBP9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 BBS10Q8TAM1 723 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 C11orf40Q8WZ69 217 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 TMEM54Q969K7 222 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC41A3Q96GZ6 507 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 ITCHQ96J02 903 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 LRR1Q96L50 414 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 A4GALTQ9NPC4 353 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 TMEM38BQ9NVV0 291 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 GLTPQ9NZD2 209 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 SELENONQ9NZV5 590 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 LEF1Q9UJU2 399 aaPredicted RBP9.89□□□□□ -0.83
NSMCE1-202ENST00000561960 IGLV3-9A0A075B6K5 115 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 A0A0B4J2E0 115 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 IGHV3-64DA0A0J9YX35 117 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 A0A1B0GX12 115 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 J3QLI3 93 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC2A10O95528 541 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 IGHV4-38-2P0DP08 117 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 PRTN3P24158 256 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 POLR2JP52435 117 aaKnown RBP9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 MRPS11P82912 194 aaKnown RBP9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 TBC1D28Q2M2D7 210 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 TMEM53Q6P2H8 277 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 SPATC1Q76KD6 591 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF627Q7L945 461 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 TSPYL5Q86VY4 417 aaPredicted RBP9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 MSRB3Q8IXL7 192 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 RBM15BQ8NDT2 890 aaKnown RBP9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 ADPRHL1Q8NDY3 354 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 CPEB3Q8NE35 698 aaKnown RBP9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF519Q8TB69 540 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC25A40Q8TBP6 338 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 ST7LQ8TDW4 575 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 RAB1CQ92928 201 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC47A1Q96FL8 570 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 TIMD4Q96H15 378 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 IKZF5Q9H5V7 419 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 MRPL39Q9NYK5 338 aaKnown RBP9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC25A37Q9NYZ2 338 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 ANGPT4Q9Y264 503 aa9.88□□□□□ -0.83
NSMCE1-202ENST00000561960 C5orf49A4QMS7 147 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 BIRC5O15392 142 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 RGS16O15492 202 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms